Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01027 ATGTTGGTGCCACCACCATGGCTGGAACGATTATTATCAACCACATTTTTCTCCATGTGCGAAACCCACATCAACTCACCCAGAAATGAATGCAACATGTACTGCCTTGATTGCAGAGACCAAGCATTCTGCTTTTATTGTAGACAATCTTGGCATCATGATCATCAAGTAATTCAAATAAGGAGGTCATCATATCATGATGTTGTGAGGGTAGCGGAGATTCAGAAGGTTTTGGACATAAGTGGGGTTCAGACATATGTTATCAACAGTGCTAGAGTTCTTTTCCTGAATGCAAGGCCTCAGAATCAGCTTAAGAACAGTAATGCTGTTAATGGTGGTAATAAAAGCAACTCCCATTTGTGTGAAATATGCAGAAGAAATCTCTTGGACCCTTTTCGTTTTTGTTCTTTGGGATGCAAGCTTGTAGGAATAAAGAAGAATGGGAATGCAAGCTTTGTCTTAAGCGCAAAGAAAGACGGAGAAAAAGGGAGAATGGAAGAAGGAATGCAAAGAAGGTTGCTATCAAAGGAAGAAGACGAAGAAGAATTGCGTGAAAGAATCCACAAACAAGTATACCAAAGCACGCTTTCTTCTCATTGTCCTCGACCATCACCACAAGCTTGCTCAAATTCAAGGAGAAGAAAGGGAATACCTCATAGGGCACCTTTAGGACCCTAA 678 0.41 MLVPPPWLERLLSTTFFSMCETHINSPRNECNMYCLDCRDQAFCFYCRQSWHHDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNARPQNQLKNSNAVNGGNKSNSHLCEICRRNLLDPFRFCSLGCKLVGIKKNGNASFVLSAKKDGEKGRMEEGMQRRLLSKEEDEEELRERIHKQVYQSTLSSHCPRPSPQACSNSRRRKGIPHRAPLGP* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01027 225 MobiDBLite consensus disorder prediction 192 211 - -
Rops3g01027 225 Coils Coil 166 186 - -
Rops3g01027 225 SUPERFAMILY B-box zinc-binding domain 18 62 - -
Rops3g01027 225 MobiDBLite consensus disorder prediction 192 225 - -
Rops3g01027 225 MobiDBLite consensus disorder prediction 161 180 - -
Rops3g01027 225 Pfam PLATZ transcription factor 61 141 IPR006734 -
Rops3g01027 225 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01027 Rops-Chr3 13294430 13295713 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops3g01027 PLATZ 1.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01027 - - gmx:100787414 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01027 3 13294430 13295713 Rops3g01027 3 13294430 13295713 ECH