Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00994 ATGGCAGCAAACGCTACTTTAAACCTCATTTCTCGCCTCCGATTCATCGTTAAGCCTCAACCTTCACCCTCACCTCATTCAATCCCTTTCCGTTTCTCTCTCACCCCTAAAACTAAGAAACCGAGTCGACTTCGATTGTTCTCGATGGCTGCGGAACCCAAGGAGTCACCTGCTAACAACCCTGGTCTCCATTCAATTCAAGACGAAGCTACCAAGGGTTACTTTATGCAACAAACTATGTTTAGAATCAAAGACCCCAAAGTCACCCTGGATTTTTATTCTCGCGTTTTGGGCATGTCTTTGCTTAAGAGATTGGATTTTCCAGAGATGAAGTTCAGCCTTTACTTTTTGGGGTATGAGAATACAGTTGAAGCTCCAACTAATCCAGTTGACAGAACAGTTTGGACCTTTGCACGAAAGGCTACAATAGAACTGACACATAATTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGGTACCACAGTGGCAATTCTGAACCTCGTGGCTTTGGACACATTGGCATAACTGTTGATGACACCTACAAAGCATGTGAAAGATTTCAGAATCTGGGAGTTGAGTTTGTTAAGAAACCAGATGATGGGAAAATGAAAGGGATAGCATTTATTAAGGATCCTGATGGCTACTGGATTGAAATCTTTGATCTAAAAACAATAGGAAACGTAACACAAGGCTTGGCTTTCGTGTCAGACAGTGCAATCTCTTTGCTTCGGAAGTACCCAGTGTTTCTTCAACTTTCCATGAGGAACGAATAA 774 0.4251 MAANATLNLISRLRFIVKPQPSPSPHSIPFRFSLTPKTKKPSRLRLFSMAAEPKESPANNPGLHSIQDEATKGYFMQQTMFRIKDPKVTLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYENTVEAPTNPVDRTVWTFARKATIELTHNWGTESDPEFKGYHSGNSEPRGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKTIGNVTQGLAFVSDSAISLLRKYPVFLQLSMRNE* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00994 257 ProSitePatterns Glyoxalase I signature 2. 163 179 IPR018146 GO:0004462|GO:0046872
Rops3g00994 257 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 78 219 IPR004360 -
Rops3g00994 257 ProSitePatterns Glyoxalase I signature 1. 78 99 IPR018146 GO:0004462|GO:0046872
Rops3g00994 257 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 68 221 IPR029068 -
Rops3g00994 257 Gene3D - 51 228 IPR029068 -
Rops3g00994 257 NCBIfam lactoylglutathione lyase 76 223 IPR004361 GO:0004462|GO:0046872
Rops3g00994 257 CDD GlxI_Zn 76 220 - -
Rops3g00994 257 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 75 222 IPR037523 -
Rops3g00994 257 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 27 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00994 Rops-Chr3 12825624 12831582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00994 25 233 Calmodulin-binding Proteins AT1G08110 75.234 3.72e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00994 K01759 - gmx:100779383 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00994 3 12825624 12831582 Rops3g00994 3 12825624 12831582 ECH