Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00989 ATGGTTGTGAGTGGCATTTGGAAGCTCAAGTTTGTCTTTGAAAAGCTTCAGAAGGGTCTTTTATTGGGAAGAAATAAATCAAGTTCAGGTGACAAAACATCTGTGCCAGAAGGACATTTTGTTGTGATTGCTGAAGATGGGGAAGAGGTAAAGAGATTCTTGGTGCCATTGAGTTTTTTAAACAACACAACATTCTTGAGGCTATTGGAGCAAGCAGCTGAAGAGTATGGCTTTGATAGAGATGGTGCACTAACCATTCCTTGTAGGCCTAGTGAGCTTGAGATGTTATTGGCACAGCAATGGCAAGAAGAAGATTCAGGGGATGGAAAAAGCAAAGGAAAGGGCATTATGGGGGTCTAA 360 0.4167 MVVSGIWKLKFVFEKLQKGLLLGRNKSSSGDKTSVPEGHFVVIAEDGEEVKRFLVPLSFLNNTTFLRLLEQAAEEYGFDRDGALTIPCRPSELEMLLAQQWQEEDSGDGKSKGKGIMGV* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00989 119 Pfam Auxin responsive protein 27 97 IPR003676 GO:0009733
Rops3g00989 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00989 Rops-Chr3 12711782 12713750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00989 35 97 Calmodulin-binding Proteins AT3G43120 49.206 4.77e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00989 - K14488 vvi:100244862 131.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00989 3 12711782 12713750 Rops3g00989 3 12711782 12713750 ECH
Rops7g00644 7 8436624 8436965 Rops3g00989 3 12711782 12713750 PCT