Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00974 ATGTGCTTAAGAGTATGCTATGCTCAACAATATTACGACCCTTTTCATTGTACTTCAGATGAAAGTTTATCAGTGTCAAGGTACAATTGCAATTCAACTCAGCATTCATGCAAAACATTCTTGGTGTATAGAGCTAATGAACGTTTCAAGACCATTTCTGATGTCTCAAAGCTCTTCAACAAGAACTCTGATGAGGTGCTTCATATAAACAATCTCACATCTTCTTCTCATGTACTTAAACAAGGTAAAGAGGTTCTTATTCCTGTTGATTGTACTTGTTCTGGCCAATTTTATCAAGCTAGACTCAGTTATGAAGTTCCTGAAAGTACAACGTTTTTCGAGATTGCTTGTGGGGTTTTTGAAGGACTAGTGAAACATCTCACACTGGCTAAGGAAAATCTTGCACGAGGTGATAAGCCTGAAGCTGGTTCTGAGCTTCATATGCCTCTTAGATGTGCATGCCCTGACAATTTCTCCAGTATAGAGAGGGTGAAGTACCTTGTTACATACCCTATAATACTAGGAGATGATTCAGATAAATTGAGCAAGAAATTTGGCATCTCACCTGAAGAGTTCTTTGTAGTTAATCACTTGGACCCCTTGACAACTCTTTACCCTGAGACAATTGTTTTCATTCCATTAAGGGATGGTCCAATCAGAATATTTGATATTCCAGATTCTCCTTCTCCACCTCCTGGTTTTCTTCCCACAAATCCAATGGTTATGACTCAGGAATCCACACAGCCATTAAATTTTTATATTGCAGGATCTATTATAGGATTTGTGTTGTTCATGACATTGCTTGCAAGTGGAGTGTACATGCAAAAATTGAGGAAAAATGATGTTGTCCACTCCTTCAATCCAACAAACTCCCCCGCTTTGTGGTCACCAATGAAAAACTCTCCAGCTAGAAACTCTACCACTTCATGCCTATCTCCAGATCTTCTTGTTGGAATAAAGTATTGCTTGCTCAATTACCATCTAGAAGAGCTAGAAAAGGCCACAAAAAATTTCAGTGAAGAAAACAAGATTGGTGATTTAGTTTATAAGGGCTTAATTAATGATCTTGAGGTGATGATAAAGAGGATGAGGTTTGAAGACACACACAAGGTAATTGATTTTCATTCTAAAATCAATCACATCAATATTGTGAACTTACTTGGTGTTTGTTATGGTGAAAACAATGTTTCATGGTCTTATTTAGTTTTTGAGTTGCCTAAAAATGGTTGCTTGAGGGACTGTATATCTGATCCATGCAATCCTCCAAACTGGTACAGAAGGACACAAATAGCCTTTGATATTGCAACTTGTCTTTACTATTTACATTACTGTTCTTTTCCTTCCTATGTTCACATGAATGTGAGTAGTAGAAACATATTCATTACAGAAAACTGGAGAGGAAAACTGGCAGATGTTGGTGGGGCATCTGCTGCAAATGCACCACTCACCAAAAGAAATGACAGTGAAATTCCAAAAGGAAAGGTGGCACCAGAGTACCTTCTGCATGGCTCAGTTTCTGAAAAGGTTGACATTTTTGCATTTGGAGTTGTCTTGCTTGAGTTGATATCAGGAAGAGACAACTTTGAAGGAAAATCAATCAAAGATTTCCTTGGATTTTTGTTGGGGGAAGCTAGTGAAGGGGGTTGTTTTGAAGGATTAAGGAGTTTCATGGATCCTAATCTGAAGGATTATTCTCTTCCAGAGGCTTTATGTTTGTCTTTTTTAGCAAAGGATTGTGTGGCAGATGATCCCTTGCATAGGCCAACTATGGATGATATCATGAAAGTTCTTGCAAAAATGGTTTAG 1806 0.3793 MCLRVCYAQQYYDPFHCTSDESLSVSRYNCNSTQHSCKTFLVYRANERFKTISDVSKLFNKNSDEVLHINNLTSSSHVLKQGKEVLIPVDCTCSGQFYQARLSYEVPESTTFFEIACGVFEGLVKHLTLAKENLARGDKPEAGSELHMPLRCACPDNFSSIERVKYLVTYPIILGDDSDKLSKKFGISPEEFFVVNHLDPLTTLYPETIVFIPLRDGPIRIFDIPDSPSPPPGFLPTNPMVMTQESTQPLNFYIAGSIIGFVLFMTLLASGVYMQKLRKNDVVHSFNPTNSPALWSPMKNSPARNSTTSCLSPDLLVGIKYCLLNYHLEELEKATKNFSEENKIGDLVYKGLINDLEVMIKRMRFEDTHKVIDFHSKINHINIVNLLGVCYGENNVSWSYLVFELPKNGCLRDCISDPCNPPNWYRRTQIAFDIATCLYYLHYCSFPSYVHMNVSSRNIFITENWRGKLADVGGASAANAPLTKRNDSEIPKGKVAPEYLLHGSVSEKVDIFAFGVVLLELISGRDNFEGKSIKDFLGFLLGEASEGGCFEGLRSFMDPNLKDYSLPEALCLSFLAKDCVADDPLHRPTMDDIMKVLAKMV* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00974 601 Gene3D Phosphorylase Kinase; domain 1 318 404 - -
Rops3g00974 601 Pfam Protein tyrosine and serine/threonine kinase 366 540 IPR001245 GO:0004672|GO:0006468
Rops3g00974 601 SUPERFAMILY Protein kinase-like (PK-like) 320 597 IPR011009 -
Rops3g00974 601 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 8 600 - -
Rops3g00974 601 ProSiteProfiles Protein kinase domain profile. 262 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g00974 601 Gene3D Transferase(Phosphotransferase) domain 1 407 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00974 Rops-Chr3 12459170 12460975 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00974 8 601 Receptor kinase-like Gene Family AT2G23770 30.392 5.13e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Rops3g00974 PK_Tyr_Ser-Thr 2.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00974 - - gmx:100818937 894.804