Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g00948 | ATGGCTAAAGATATTGAGGTTCAAGAGCAAGGAGAATACTCAGCTAAAGACTACCAAGACCCACCTCCAGCACCGTTTTTTGATGCAGAGGAGCTGACACAGTGGTCCTTCTATAGAGCCATTATTGCTGAGTTCATAGCAACCCTTCTCTTCCTTTATGTGACTGTGTTGACCATAATTGGTTACAACAGCCAAACTGATAAGACCAAGGGTGGCACTGAGTGTGATGGGGTTGGTGTTTTGGGTATTGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACCGCCGGTATTTCTGGAGGACACATAAACCCGGCTGTGACATTTGGGTTGTTCCTTGGACGCAAGGTGTCACTGATAAGGGCATTTATGTACATGGTAGCACAGTGTGCTGGTGCAATCTGTGGTACTGGACTTGCCAAGGGATTCCAAAAAGCATACTACAACAGGTATGGTGGTGGTGCCAACTTTGTGCAAGATGGTTACAGCAAAGGTACCGCTTTGGGTGCTGAGATCATTGGTACCTTCGTTCTTGTCTACACTGTCTTCTCTGCCACTGATCCTAAGAGAAACGCTAGGGACTCCCATGTTCCTGTTTTGGCACCACTTCCCATTGGATTTGCTGTCTTCATGGTTCACTTGGCTACAATCCCAGTTACTGGTACTGGCATTAACCCAGCAAGGAGTTTTGGAGCTGCTGTTATCTACAACAAAGACAAAATCTGGGATGACCAATGGATTTTCTGGGTTGGACCAATTATTGGAGCTGCAGTGGCTGCATTCTACCACCAATACATTCTTAGAGCAGCAGCTATCAAAGCACTTGGATCCTTCAGGAGCAACGCTTAA | 858 | 0.465 | MAKDIEVQEQGEYSAKDYQDPPPAPFFDAEELTQWSFYRAIIAEFIATLLFLYVTVLTIIGYNSQTDKTKGGTECDGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRAFMYMVAQCAGAICGTGLAKGFQKAYYNRYGGGANFVQDGYSKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNKDKIWDDQWIFWVGPIIGAAVAAFYHQYILRAAAIKALGSFRSNA* | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g00948 | 285 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 8 | 274 | IPR034294 | - | |
Rops3g00948 | 285 | FunFam | Probable aquaporin PIP1-2 | 24 | 285 | - | - | |
Rops3g00948 | 285 | SUPERFAMILY | Aquaporin-like | 31 | 271 | IPR023271 | - | |
Rops3g00948 | 285 | CDD | MIP | 39 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g00948 | 285 | ProSitePatterns | MIP family signature. | 105 | 113 | IPR022357 | - | |
Rops3g00948 | 285 | Gene3D | Glycerol uptake facilitator protein. | 24 | 285 | IPR023271 | - | |
Rops3g00948 | 285 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Rops3g00948 | 285 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g00948 | 285 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g00948 | 285 | PRINTS | Major intrinsic protein family signature | 173 | 191 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g00948 | 285 | PRINTS | Major intrinsic protein family signature | 209 | 231 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g00948 | 285 | PRINTS | Major intrinsic protein family signature | 249 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g00948 | 285 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g00948 | 285 | Pfam | Major intrinsic protein | 31 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g00948 | 285 | NCBIfam | MIP family channel protein | 43 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g00948 | Rops-Chr3 | 12065177 | 12067250 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g00948 | 1 | 283 | Major Intrinsic Protein MIP | AT5G60660 | 80.212 | 1.97e-174 | 481 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g00948 | K09872 | - | gmx:100818032 | 545.814 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops7g00684 | 7 | 9031762 | 9033547 | Rops3g00948 | 3 | 12065177 | 12067250 | PCT |