Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00881 ATGACGGAGGAAGGCAAGGGACATGAGGATGGACAAGCCTTCGAACCTGAAACCGAAGGTGAATCACCCGTTGAAAGTGCCAAACACTTTGAACATGAAACTGAAGGCGAATCAATTGTTGAAACTGCCAAACTTTTAGGGATTCTGCTCCAATGCCTCAAATCGGTGTCCATAGCTATGCAGGTTATGAAGAAGGGTGATACTATTTTCATTGGTAAATATGTGCTTACAGGAAGTGAAACAATTTTTGTATGGCTGGGGGTAATGCAATCTCTACACCCTTCCATTGCTAAAGTGCCTGGACCATCAAAGCTTGTTTCTTGGGTAGCAAAGTATGTTGCTTCTGGTTTAGATGCTTTATACCTAACTAGATTTGAAGCTGCTGAACATTGGCAGGCTTTGTATTCTTCTGTTAGCCACTGCCAGAAATACTTGGCTCAACATCATTTTATGAACTTAAAGAAGGTAGCAATTACCACACAATATGCAAGGAGAGGAAAAGTTTCTTGGCGAGAATTACGAAAGCTCAAGATGATTGACATGGAAGATGCAAAAACACAAGAAAACGAAAATTTACATTCTGCTTTGCAAGAGATGCAACGTCAGTTTAAAGAAACGAAGTTATTGCTTCAAACGGAGCATGAGGCTACAAAAAGAGAAGCAGAGAGAGTGTCTGTCATCTGTTGTTTGACCATGCTTTGTTGGAGAAGATCACAAATGAAAAACAAACTTAAGCGAGAAGGTGAACACCCTTCCCTTGCTTCTCAATCTCAGGGAGTTGTACTTGAGATTGCTAGCTCTAGGATGAGTTTGATGCCTAGTTGTGATGGAAACTCGCCTCCTTGTCTTATGAAGTCCGAATTGAAGTCGAATGACATTTTTGAGTTTGTGGGTATACTGATATCTGATCCAAAGCTTCAGGAGGACAATGAATATAGTGATTTATCAAATGGATTTTTTGAAGATCCTTTGCACCATTTATCACCCAACAAGGTACCACGCCTTCATTGTTTTATTCACAAGAAACTTGCGATTCAGACTTCCTTCAAAATAACCCTATTGTGGATCTCCTATCGTAAATATTTATTTGAAGTTGTGGATCAAAGAGTGAAGCTGGTTGCTAGTTACTTACCAGAGGAACAGTCTGATTCTAAGTTTCCAGGGGAAGATTAA 1173 0.3998 MTEEGKGHEDGQAFEPETEGESPVESAKHFEHETEGESIVETAKLLGILLQCLKSVSIAMQVMKKGDTIFIGKYVLTGSETIFVWLGVMQSLHPSIAKVPGPSKLVSWVAKYVASGLDALYLTRFEAAEHWQALYSSVSHCQKYLAQHHFMNLKKVAITTQYARRGKVSWRELRKLKMIDMEDAKTQENENLHSALQEMQRQFKETKLLLQTEHEATKREAERVSVICCLTMLCWRRSQMKNKLKREGEHPSLASQSQGVVLEIASSRMSLMPSCDGNSPPCLMKSELKSNDIFEFVGILISDPKLQEDNEYSDLSNGFFEDPLHHLSPNKVPRLHCFIHKKLAIQTSFKITLLWISYRKYLFEVVDQRVKLVASYLPEEQSDSKFPGED* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00881 390 Coils Coil 182 209 - -
Rops3g00881 390 PANTHER UNCHARACTERIZED 194 346 IPR019140 -
Rops3g00881 390 MobiDBLite consensus disorder prediction 1 33 - -
Rops3g00881 390 Pfam Mini-chromosome maintenance replisome factor 193 345 IPR019140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00881 Rops-Chr3 11266904 11274062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00881 139 227 Myosins gene family AT4G28710 45.082 4.88e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00881 - K10357 aprc:113852715 148.288