Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00855 ATGCCAACCAAAGGAATGAGAAGCGTTTTCTTCAAACCATCTCCTCCTCCTTCATCCACCTTATCGCCACCTTCCTCTCCTCTACGCACCTTCTCAGATTCCATAATGGAAGATAACATCGAAACGGCAGAGTCGTTGATAACCAAATGGGATTATTCCAACACAAACAACCAATCCAAAATCGTAACCCCTCTTTTCAGTGGAACTCGCGAGGAAGCCAAACAGTACCTTAACGCCGTTGAGGGTCTACAATCCGCTATGCAGTACTTCGTCGCACGTGACTCCACCTCCAACGCACTCGTGCGAGCTCAGTTTTTGATGCAACTCGCGATGAAGACGTTGCAGAAAGAGTTTTACCAGATATTATCCGCAAACAGGGAACATTTGGATCCTGAAACGGTTTCCAACCGTTCCTCCACCGATCGCAGAAGCAGTGTCTCCGATTACGACGATGAAATCTCCGAGGAGGAGTTTTGTGTCGCCGGAAACTCAATCTCCGAGACGGAGAGGGTTTCCATGATCGCCATGGCGGATTTGAAGGCGATTGCGGATTGCATGGTTTCCTCTGGTTATGGAAAAGAGTGCGTAAAGGTTTACACCATCATGAGAAAATCGATCGTTGATGAGGCATTGTACCATCTCGGAGTTGAACGACTGAGCTCCTCTCAGGTCCAGAAGATGGATTGGGAGGTTTTGGGGTTGAAGATCAAGAGTTGGTTAAACGCCGTCAAGGTCGCCGTCGGAACTTTGTTCCACGGAGAGAGGATCCTCTGCGATGAAGTTTTCGCCAATTCCTCAGGGAAGAGGATTCCGGAGTCATGTTTCGCAGAGATCACCAAAGATGGCGCAATGTTGCTGTTTGGATTCCCGGAAATGGTGACAAAATGCAAGAAAACGCCCGAGAAAATATTCAGAACTCTGGATTTATACGATGCAATCTCTTCTCACTGGCCTCAAATTGAATCCATCTTCTCATTCGAATCAACCTCCAATATCCGTTCACAGGCCGTTACTTCGCAGGTTAAACTCGGTGAGGCCGTTAGAGCGATGCTAACGAACTTCGAATCAGCGATTCAGAAGGAAAATTCGAAGAAACCGGTTCCAGGCGGTGGGGTCCACCCTCTCACGCGCTATGTAATGAATTACATCACGTTCCTCTCCGATTACGGCGGCGTACTCGCTGAAATCATCGCCGATTGGCCGCTACCTCCGTTGCCGGAGTCTTACTTTCGAAGCCCCGCGCGCGAGAAAAACGCGTCATCTTCGGAAGTGTCTGATCAGGAGCGAATCGCGTGGCTTATACTCGTCGTGCTCTGCAAGCTTGATGGCAAAGCGGAACTTTACAAAGAGGTGGCGCTTTCTTACCTGTTCCTCGCTAATAACATGCAATACGTCGTCTTAAAGGTTCGCAAATCGAACCTAGGGTTCGTTCTAGGGGAAGATTGGTTGGCGAAGCATGAATTGAAGGTTAGAGAGTACGTGTCCAAGTATGAGCGTGTGGCGTGGAACAGAGTGTTTTCTTCGTTGCCGGAAAATCCCACGGCGGGGGAAGCCAAGAAATGCTTCGTGAGCTTCAACGCTGCGTTTCATGAAGAGTGTAAGAAACAATCCTCGTGGATCGTGTCTGACCCGAAACTTCGAGACGAAATCAAAGCTTCGTTAGCTTCGATGTTGGTTCCCAAGTACAGTGAATTCTTCGAGAAGAATCGGGTCGGGTCGGAGTCGGTTATAAGTATTTTACCCGATGATATAGAGAATCACTTGTCTGGCATTTTGCATGGGGTTGGAGATTCGGGTAGCACCACGTCACGTTCTTCTTCGACGACGTCGTCTTGGCGTCGCTCCAATCGCCGGTGA 1857 0.49 MPTKGMRSVFFKPSPPPSSTLSPPSSPLRTFSDSIMEDNIETAESLITKWDYSNTNNQSKIVTPLFSGTREEAKQYLNAVEGLQSAMQYFVARDSTSNALVRAQFLMQLAMKTLQKEFYQILSANREHLDPETVSNRSSTDRRSSVSDYDDEISEEEFCVAGNSISETERVSMIAMADLKAIADCMVSSGYGKECVKVYTIMRKSIVDEALYHLGVERLSSSQVQKMDWEVLGLKIKSWLNAVKVAVGTLFHGERILCDEVFANSSGKRIPESCFAEITKDGAMLLFGFPEMVTKCKKTPEKIFRTLDLYDAISSHWPQIESIFSFESTSNIRSQAVTSQVKLGEAVRAMLTNFESAIQKENSKKPVPGGGVHPLTRYVMNYITFLSDYGGVLAEIIADWPLPPLPESYFRSPAREKNASSSEVSDQERIAWLILVVLCKLDGKAELYKEVALSYLFLANNMQYVVLKVRKSNLGFVLGEDWLAKHELKVREYVSKYERVAWNRVFSSLPENPTAGEAKKCFVSFNAAFHEECKKQSSWIVSDPKLRDEIKASLASMLVPKYSEFFEKNRVGSESVISILPDDIENHLSGILHGVGDSGSTTSRSSSTTSSWRRSNRR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00855 618 MobiDBLite consensus disorder prediction 130 149 - -
Rops3g00855 618 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 585 IPR004140 GO:0000145|GO:0006887
Rops3g00855 618 MobiDBLite consensus disorder prediction 595 618 - -
Rops3g00855 618 MobiDBLite consensus disorder prediction 130 150 - -
Rops3g00855 618 Pfam Exo70 exocyst complex subunit 237 589 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops3g00855 618 MobiDBLite consensus disorder prediction 1 27 - -
Rops3g00855 618 SUPERFAMILY Cullin repeat-like 46 589 IPR016159 -
Rops3g00855 618 Gene3D Exocyst complex component Exo70 47 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00855 Rops-Chr3 10522896 10525296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00855 10 594 EXO70 exocyst subunit family AT5G59730 48.130 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00855 K07195 - gmx:100810579 873.233