Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00844 ATGATTTCCCAGTTCCTCTTATTAGTTCTCATTCTCTTCCTCTCTTCTTTTCTTCTAAAACTCCTCTTCTTTAAGAGAAACAATAAACCAAAGTCTCATTTGAGGCACCCTCCAAGTCCACCAGCAATACCCATAATTGGCCATCTCCATTTGGTTAAACCCCCCATCCATCAAGCCTTCCGAGACCTCTCCCACAAATATGGTCCTCTTCTTTCCCTTCAACTTGGTTCTGTTCGATTCATATTGGTCAGCAACCCAGCACTCGCCAAAGAGTTTCTTAAAACACACGAGCTTACATATTCTTCCCGTAAAAAGAACATGGTCATCAACATGGTCACATACGATAATGCCACTTTTGCTTTTGCCCCTTATGACACCTATTGGAAATTCATTAAAAAGCTCAGCACCACTGAACTCTTGGGCAACCGAACTATTGGACAATTCTTACCTATTCGGACTAGGGAACTCCATGAACTCATTAAAAATCTAGCTTGCAAATCCAATGTCAGAGAGAGCGTGAACCTCACTGAAGCGTTGTTGAATCTTTCCAACAACATAATATCGCAGATGATGTTGAGTATCAAGAGCTCAGGAACAGACGGCCAGGCAGAAGAGGCGAGGGCTTTGGTTCGGGAGGTCACACAGATTTTCGGGGAGTTTAACGTATCGGATTTCATAGGATTTTTCAAGAACATAGACTTGCAAGGTTTCAAAAAGAGGGCCATGAACATACACAAAAGGTATGATGCTCTGTTAGAGAAGATTATCTCTGATCGTGAGGATTCGAGAAGGAAACTGAAGTTAGAGGGTTGTGAAGATGGAGAAGAGAAACTGAAGGATTTTCTTGACATTTTGCTTGATGTCGCTGAGGAGAAAGATTGCGAGGATTACTTTACAGCAGCTACTGACACTACTGCCATTTCAGTGGAATGGGCAATAACAGAACTGTTCAACAATCCAAGGGTGCTGAAGAAAGCCCAAGAGGAGGTAGATAAAGTCACTGGGAATGAACGGTTAGTGTGTGAAGCAGACAGTTCAAACCTGCATTATATCCATGCCATCATAAAAGAAACAATGAGGCTTCACCCGCCACTACCAATGCTTATGAGGAAGGGAATAAAAGACTGTGTGGTTAATGGGTACATGATTCCAAAAGACTCAATAGTATGCACAAACATTTGGGCCATGGGAAGGGACCCAAAGATATGGGAAAACCCATTAGAGTTCAAGCCAGAGAGATTTCTAGAAGGTGAAGGAAGTGCTATAGATATCAAAGGACATCACTTTGAGTTGTTGCCATTTGGTTCTGGAAGGAGAGGTTGCCCTGGCATGCCTTTGGCTATGAGGGGATTACCTGCCATAATTGGAGCATTGATACAATGCTTTGAGTGGAAGATGTTTGACTCCCAAGGTAAAATCTTAGGCCCTGGTAGAACAATCGATGTGGATGAACGGCCAGGATTGAGTGCTCCCAGGGCCAATGAGCTTATTTGTATCCCAGTAGCCCGATTGAATCCCACCCCTTTTCTTCAAGTGTAG 1539 0.4321 MISQFLLLVLILFLSSFLLKLLFFKRNNKPKSHLRHPPSPPAIPIIGHLHLVKPPIHQAFRDLSHKYGPLLSLQLGSVRFILVSNPALAKEFLKTHELTYSSRKKNMVINMVTYDNATFAFAPYDTYWKFIKKLSTTELLGNRTIGQFLPIRTRELHELIKNLACKSNVRESVNLTEALLNLSNNIISQMMLSIKSSGTDGQAEEARALVREVTQIFGEFNVSDFIGFFKNIDLQGFKKRAMNIHKRYDALLEKIISDREDSRRKLKLEGCEDGEEKLKDFLDILLDVAEEKDCEDYFTAATDTTAISVEWAITELFNNPRVLKKAQEEVDKVTGNERLVCEADSSNLHYIHAIIKETMRLHPPLPMLMRKGIKDCVVNGYMIPKDSIVCTNIWAMGRDPKIWENPLEFKPERFLEGEGSAIDIKGHHFELLPFGSGRRGCPGMPLAMRGLPAIIGALIQCFEWKMFDSQGKILGPGRTIDVDERPGLSAPRANELICIPVARLNPTPFLQV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00844 512 Gene3D Cytochrome P450 22 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PANTHER STEROID 21-HYDROXYLASE-RELATED 13 493 - -
Rops3g00844 512 Pfam Cytochrome P450 37 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 SUPERFAMILY Cytochrome P450 37 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00844 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00844 Rops-Chr3 10300591 10303023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00844 2 503 Cytochrome P450 AT5G06900 39.652 1.30e-135 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00844 K23179 K24188 gmx:100783503 808.905