Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00828 ATGTCTTTACAAAATAAGGGATTCTGGATGGTAAAGGGATCTGGACATGTTAATAACAGAGAGACAGTATTTGATAATCCTTCCAAAATTGAACCAAAACGACCTCATCAATGGTTTGTTGATGCTGCTGAAGTAGATTTTTTTCCAAACAAGAAACAAGCGGTAGAAGAAGCAAATGAAAAATCTAGTTCTGGATTTTCAAATGTAAATTTTACTCCCTGGGAGAACAATTCCAATTTTCAATCAGTCCCAAACCAATTTATTGGTCGGTTATTTGGGTCTGAAACTAGGCCTGTCAATTTCACTGAAAAGAATACTTTTGTTTCTGCTGATGATTCTAATGTGAGATCAAAGATGACCACCAATCAATATGGAGATGATACATCTTTTGGCTTGTCTATATCTCATTCTGTTAAAGATTCTGAAGCATGTACAAATTTTGGTGGAATCCAAAAAGTCAAAGTAAATCAGTTTAAGGATTCTGATGATGTACAGGCTCCAGAGGGACATAATTTTAATACACAGAGAAATGGTGATCTCCATCGGGCCTATGATGGGGAAGTTATTAGAAGGTCTGCATCAATAGGGCACGCCTTTGACCAGGATGGTAATGTCACTTCAATGGGACTCGCCTACAGCAGAGGGGATGCCCTTGTCAGATCATTCGGTGCCCCCTTTTGCAAAGGAGATGAGACAGTCATATCAATTGGTGAATCCTATAATAAAGAGGACACAAATATAATTTCTTTTGGTGGGTTCCCAGATGAACGGGACATTATCTCTGTGGGCAGGCCTGCTGCAGACTATGAACAATTATATAATCAATCTTCAGTTCATGTGTCAACAACAGCTCATGAAAAAGAGTTGGATGCATCAAAGTCTAATGAAGTTGCCAATACTCCTCAGGTAGCAACAGTAAAGTCTGAAACCGTGTCCAAGAATAAACAAGAGTTCAAAACAGCGAGGAAAGAAGCTCCAAACAGCTTCCCTTCTAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGTGTGCCAGTAAAGTATGTCTCAGTGGCACGGGAGGAACTTTGTGGAATTATAAAAGGCTCTGGCTATCTTTGTGGGTGTCAGTCATGTAACTATTCTAAGGTTTTGAATGCTTACGAGTTTGAGAGACATGCTGGTTGCAAAACGAAACATCCAAACAGTCACATTTATTTTGAGAATGGGAAGACCATTTATCAAATAGTACAGGAGTTGAGGAGTACCCCTGAAAGTTTGTTGTTTGATACAATTCAAACAGTTTTTGGTGCACCAATTAATCAGAAAGCATTTCGCATTTGGAAAGAATCATTTCAAGCTGCTACCCGTGAGCTTCAACGTATTTATGGAAAGGAAGAACTTAACCTATAA 1395 0.3892 MSLQNKGFWMVKGSGHVNNRETVFDNPSKIEPKRPHQWFVDAAEVDFFPNKKQAVEEANEKSSSGFSNVNFTPWENNSNFQSVPNQFIGRLFGSETRPVNFTEKNTFVSADDSNVRSKMTTNQYGDDTSFGLSISHSVKDSEACTNFGGIQKVKVNQFKDSDDVQAPEGHNFNTQRNGDLHRAYDGEVIRRSASIGHAFDQDGNVTSMGLAYSRGDALVRSFGAPFCKGDETVISIGESYNKEDTNIISFGGFPDERDIISVGRPAADYEQLYNQSSVHVSTTAHEKELDASKSNEVANTPQVATVKSETVSKNKQEFKTARKEAPNSFPSNVRSLISTGMLDGVPVKYVSVAREELCGIIKGSGYLCGCQSCNYSKVLNAYEFERHAGCKTKHPNSHIYFENGKTIYQIVQELRSTPESLLFDTIQTVFGAPINQKAFRIWKESFQAATRELQRIYGKEELNL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00828 464 Pfam Tify domain binding domain 359 414 IPR032308 -
Rops3g00828 464 PANTHER AUTOIMMUNE REGULATOR 9 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00828 Rops-Chr3 10134625 10138595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00828 279 447 PHD Transcription Factor Family AT3G53680 46.591 2.76e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00828 - - gmx:100802229 811.216