Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00816 ATGGCGAAGACACTGATTTCGTCTCCTTCATTCATCGGCTCGCCACTTCCTTCACTCCCTCGCCATCACTTCCACCACCGCACAACCAGGCTAGTCACCACCAAGGTCCACTTCAGCTTCCACCAAATCCCTCCAATTCAATCCATTAACCATTCCATTGACTTAGCCGGAATCGTCTCCAGAGCTGAAGGCCTTCTTTACACGCTCGCCGATGCCACCGTTGCGGCGGATGCCGCCACTTCCGCGGATGCCGCCGTCGCACAGAAGAACGGAGGCTGGTTCGGCTTCATCTCCGAAGGCATGGAGTTTGTTCTCAAGGTGTTAAAGGATGGTCTCTCTGCTGTGCATGTGCCATATGCATATGGATTTGCTATCATATTGCTCACTGTTATAGTTAAGGCCGTTACGCTTCCCTTGACGAAGCAACAGGTCGAATCAACACTGGCTATGCAAAATCTTCAACCTAAAATTAAGGCCATTCAAGAAAGATATGCTGGCAATCAGGAAAGAATACAACTTGAGACTTCAAGGCTTTATAAGCAGGCTGGGGTTAACCCATTGGCAGGTTGTTTACCAACTTTGGCTACAATACCAGTCTGGATTGGTCTCTACCAAGCTTTATCAAATGTGGCAAATGAGGGACTATTAACAGAAGGTTTCCTTTGGATCCCATCTCTTGGTGGTCCTACTACCATTGCTGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGTCATCCACCTTTGGGATGGCAGGATACCGCCGCATATCTTGTTTTACCTATTCTTCTTGTTGTTTCTCAATACTTTTCAATGGAAATCATGAAACCACCTGAGACAAATGATCCTGCTCAAAAGAATTCACTTCTTATTTTCAAGTTTCTCCCACTCATGATTGGTTACTTCTCACTATCGGTCCCGTCAGGACTAACAATTTACTGGTTTATCAACAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTAGGAGGTGCAAAGCCTGCTGTGAATGAAAATGCTAGTGGAATTATTACCGCAGGACGTGCTAAAAGATCAGCTTCTCAGCCAGCAAAGGGTGGTGAAAGGTTTAGGCAGTTAAAAGAAGAGGAGAAGAAGAAAAAGTTAAGCAAGGCACTGCCAGTGGAGGAAGTTCAACCTCTGGCTTCTGCTTCTGATGATGGCTTGGATGTAGAAAGCGACAATAGGGAACAGGAAGTTGCGGAAGAAGCATATGCCTCTAAAGTTGGCGAAGAGGTTCAAAGTTTTTCTAGGGAAAGAAGAAGCAAGCGTTCAAAGAGGAAGCGTGCTGTATAA 1335 0.4577 MAKTLISSPSFIGSPLPSLPRHHFHHRTTRLVTTKVHFSFHQIPPIQSINHSIDLAGIVSRAEGLLYTLADATVAADAATSADAAVAQKNGGWFGFISEGMEFVLKVLKDGLSAVHVPYAYGFAIILLTVIVKAVTLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYFSMEIMKPPETNDPAQKNSLLIFKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAKPAVNENASGIITAGRAKRSASQPAKGGERFRQLKEEEKKKKLSKALPVEEVQPLASASDDGLDVESDNREQEVAEEAYASKVGEEVQSFSRERRSKRSKRKRAV* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00816 444 MobiDBLite consensus disorder prediction 376 444 - -
Rops3g00816 444 NCBIfam membrane protein insertase YidC 121 334 IPR028055 -
Rops3g00816 444 CDD 5TM_YidC_Alb3 122 335 IPR047196 -
Rops3g00816 444 PANTHER OXA1 71 380 IPR001708 GO:0016020|GO:0032977
Rops3g00816 444 Pfam 60Kd inner membrane protein 121 335 IPR028055 -
Rops3g00816 444 MobiDBLite consensus disorder prediction 402 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00816 Rops-Chr3 9990372 10009468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00816 24 391 Chloroplast and Mitochondria Gene Families AT2G28800 68.464 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00816 K03217 - gmx:100817173 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00816 3 9990372 10009468 Rops3g00816 3 9990372 10009468 ECH