Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00803 ATGGGTAACGGAATAGGGAAGCTAACGGTGTGTTTCACGGGACACGGTGGCGGAGGCGGTGGCCGGAAGCAGGATATATCCATTTTGATAACGGAGCCGTTAGATGAGGGACTGGGTCACTCGTTCTGCTACGTTAGACCCGACCTGACCCGGATATCTTCTTCTAAGGTTCACTCTGAAGAAACGACGACGTTCAGAACGATCTCCGGTGCTTCTGTGAGCGCTAACACGTCGACGCCGTTATCGACGGCGTTTGTGGATTTGTATTCCTATGGTTGCATCGATAGAGCTGCGGCGTTTGAAAGTTCAACGTCGTTTGCTTCGCTTCCTCTGCAACCGATTCCACGAAATCTCATGAATTCGGGTCCTTTTTCCGGGAACCTCGGAAACGGGTTTCCGGGTTCGGGTCCTTTGGAAAGAGGGTTCTTATCAGGTCCGATTGAACGTGGTTTCATGTCGGGTCCAATTGATCGTGGGTTGTTTTCGGGTCCGATTGAAAAGGATAGCTCAGACCCGTTTCAAAGAAGCTTCTCACACGGTGGATTGGGTTTTACGGTGAGACCCAGATCGAGAAAGGGTCGTTGGATTCGGGTTCTTCGGAGAGCAATATCGAAGACTCTGTCACGAGGGCAAAACTCTATTGTTGCTCCGATGAAAGGTGTGGTGGTGAAGGAACAGGATTGGATCGTTGCTTCAGATAAGCATAATGAGAATTTGACAGTGAGTAGTGTGAATTTCAGCAGTGAAGGTAGTTTGGAAGATGATGATTCGATGGAAAGTCAGAATCTTCAATGGGCTCAAGGGAAAGCAGGGGAAGATCGTGTTCATGTTGTGGTTTCTGAGGAACATGGTTGGGTTTTCGTGGGGATCTATGATGGTTTCAATGGTCCTGATGCACCTGATTATTTGCTTTCAAATCTTTACACCGCCGTGCATAAGGAGCTGAAGGGTTTGCTTTGGGATGATGGGTGTGTTCCAGAGAATTCGAATTTGGAAGCTCAAGATTCGATGCCGATCGTTAATGTTGATGTTAAAGAGGACACGTTGGTAGATGCTTGTTCTCAGTGTGATGAACAAGAGAATAAAAATCATGCTTGTGCAAGTGGGGATGCCGTTTTTAAGAGAAAAAGATCTAAGAATTCCAATAACAAGTACAAAGGTGCAGCTAGGAAGCGTGAGGAGAATCTGAGGATGTGGAAGTGTGAATGGGATAGGGAAAGATTAGAGCTTGATAGAAGATTAAAGGAACAACTAAGTTTAAGTCGATCTGGGTCTGAGGCCAACTCATCTATTAACCATTCAGAAGTGTTGGAAGCTCTTTCTAGAGCTTTAAGGAAAACGGAGGAGTCTTATCTTGATGCTGCTGATAAGATGGTGAGGGAGAATCCTGAACTTGCTTTGATGGGTTCTTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATGTTTATGTGATGAACGTGGGAGATAGTAGAGCTGTGTTGGCTCAAAAGGCTGAGCCTGATTACTGGCTTGGTAAAATTAGGCAGGATTTGGAGAGGATCAATGAAGAGACAATGAATGATCTTGAATCATGGGATGCTGATACATCAAATGTGGTTCCCACTCTAAGTGCTTTTCAGCTTACCAAGGATCATAGTACCAATGTGGAAGAAGAAGTCCACAGAATAAAAAAAGAGCACCCGGATGATCCTTGTGCTGTGGTAAATGATCGAGTTAAGGGTTCTCTCAAGGTTACCCGAGCATTTGGTGCCGGATTTCTCAAACAGCCCAAGTGGAACAATGCACTTCTGGAGATGTTTAGAATAGACTACGTTGGAAATTCTCCTTACATCAGCTGCCTACCATATCTAAAACACCACAGATTAGGCCCAAAGGACAAATTTTTGATTTTATGCTCCGATGGGCTCTATCAATACTTGTCAAATGAAGAAGCAGTAGCTGAAGTTGAGCTTTTCATCACATTACAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTGTTATTTCGTGCTGCAAAGAAAGCTGGTTTGGACTTTCACGAGTTGCTTGAAATTCCACAAGGTGATAGGCGTCGTTACCATGATGATGTTTCCATCATCGTTATTTCTTTGGAGGGAAGGATATGGAGGTCATGTGTATAA 2148 0.4502 MGNGIGKLTVCFTGHGGGGGGRKQDISILITEPLDEGLGHSFCYVRPDLTRISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLMNSGPFSGNLGNGFPGSGPLERGFLSGPIERGFMSGPIDRGLFSGPIEKDSSDPFQRSFSHGGLGFTVRPRSRKGRWIRVLRRAISKTLSRGQNSIVAPMKGVVVKEQDWIVASDKHNENLTVSSVNFSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTAVHKELKGLLWDDGCVPENSNLEAQDSMPIVNVDVKEDTLVDACSQCDEQENKNHACASGDAVFKRKRSKNSNNKYKGAARKREENLRMWKCEWDRERLELDRRLKEQLSLSRSGSEANSSINHSEVLEALSRALRKTEESYLDAADKMVRENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDADTSNVVPTLSAFQLTKDHSTNVEEEVHRIKKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00803 715 Coils Coil 437 457 - -
Rops3g00803 715 SMART PP2C_4 256 704 IPR001932 -
Rops3g00803 715 CDD PP2Cc 410 706 IPR001932 -
Rops3g00803 715 ProSiteProfiles PPM-type phosphatase domain profile. 255 706 IPR001932 -
Rops3g00803 715 FunFam probable protein phosphatase 2C 4 230 711 - -
Rops3g00803 715 Pfam Protein phosphatase 2C 439 662 IPR001932 -
Rops3g00803 715 SUPERFAMILY PP2C-like 269 707 IPR036457 -
Rops3g00803 715 Coils Coil 508 528 - -
Rops3g00803 715 Gene3D - 231 711 IPR036457 -
Rops3g00803 715 PANTHER PROTEIN PHOSPHATASE 2C 252 704 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00803 Rops-Chr3 9804957 9808219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00803 1 715 PP2C-type Phosphatase Gene Family AT1G07630 69.780 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00803 - - gmx:100812903 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00803 3 9804957 9808219 Rops3g00803 3 9804957 9808219 ECH