Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00802 ATGGGAAAGCATTTGCTTTCTTCCAAGAAGTCCACTATTCAAATTCAGGATAATCATCCAAGCTGCATGTGGGGCATACTTCAAATTCTTCACTACCATCATTGGCATAATATCAGAAACGTGTTTCCTCACAAAAAGCATTACTGGGGAAGACATGCCAGATATAAGAGAAAACACCTTTTGCATAACCATGGCAAAGACCATCAATTTGGAGTTGCAGAAGCAGAATCCCGCTTGGACAGGCAGCATAGCCAAAAGTTGAATGCTACAATCGAAAGCTCTCCAAAAAGTAGCAAAAAAGGATCATGCACTGAAAATAGTTCTAAGGAAAAAAACTCCAAAGACAAATACTCGGGGCAAAACCAAGCCACTGGTGAGCATGCACTTCATCTGCAGAAAGATGGCAAGATAATAGAAGCTTCCCTTAACCAAAAGCTTATGGAAGCAAAGAAGTTTGACCGAGATATTTCCATTAAATCTGAGAAACATCTTGATGTCTTGGAGGTATTTAGAGTGGAGAAGGGCTTATTCCTGGAATTTTACCGAGATCTAGATTTTGGTGGGAAAAACTCCCATCAGGCTTCCAATTACAAAGCAAGATTGACAAAATCAGGGTCATTTCCTCTAAATTCACAGATGAAAAACATTAGCCTTAGTACCTTCGAACACAAGCAAAACGAAATTTGGGCCTTTCCTAAGAGGGAAAAGTTGCTTGTTGGTACTCAAGCACAAAAAAGATCTGCATCCGGTGTTGCAAAAGACATTTCTTTTGTGAAGCCATTGCCTTTAGAGAGTACTCTTAGTGTGGACAGTGCCATGAAACAAAAACTAAGTTTTTCTTCTTCAAGCTATTCTCAAGGAAGCAAAGGGTGGAATCAAATGGTTCTTCGTCGTTTCAAAATTATAAAACAGAAGATAAAACATGCAATTAAGGAATTCAAAAGAAGTGGTCACCAAACTTCTGTTGAAGCTATCCACCACAGAGCTTCATCTAAATATAGGATAGTCAATGATGAGAAGGAGGACTCATCAAGCTTAGATGATGGCGTGATTCAAGAGTATATAAAGAATATAATCTCAGATAAGACTGAAGCTTCTGATTATGATTCCAACAAACATGAAGTTCGCCTAATAAGAAGATCTTCCTCTCTAAATGAATCCCTGGATAGATATGCTAAGTTGTCTGAGCAAAGCTTCAGCAAAGACATCAAGTGGTATGGCTCAATGTCTAAAAGCTTAAAATTGGCAAATGAGGATAAGGATAACATGAGTGGTTGTGCTCCAAAGTCTTCCAGAAGGAATTTGTCTGTGCCTAATCTCGAATCTTTAGGCTTCCTTCTCCATGAGGCACTTTTTGATTCAAATGATATAGGGATCACAGTGGAAACTGATATTCATGTTCAAAGAAAATCAGTTAGCATTCCTTTAGATAGAGACAAATCACTTGATCATCTTATAGAGACTGAAATGGGGGAAACAGTAGGGAAAGGTGGCAAGGATGTGAATCCTAGTCCTTTATCTGGCAAGATTATTGTGAAAAATGATGAGGAAGTAAGTTGCAACCATAGGAAGGACACACACGAGCCAGTGGTGGGAGATGGAAGTTTTCCGGTTCCCCAAGAAAAAGTGGCAATAAATATGACTATCTATCCTAACAAGGAGGTAATGACAACTCTTGAATCTAGCTGTGAAGGCAATAAAATCAGCTATGCAGAAGGTAAAGAATTAAATACCAGAGGCTCTAGCATGGATGAATTGTTGACTGAGTTACCAAGTATTAGCGCAACAGCAAAAGGTGCAAAAATTAAATCAGATACAAACAATGATTCCAATTTCAAATATGTGAAAGATGTTCTTGAATATTTGGGCTTCATGGGAAATAAGGATATACAAATGTGGCATACAATAGACCAGCCACTAAATCCTTCCTTATTAATGGTGGATTTGAATGCAACTTTCTGCCATGAAATTGAATCCTCTGAAGAGACAATCAACCCCTATCATTACAAGCTTCTTTTTAATGTAATTAAAGAGGTGCTTCTTGAAATACATGAGAGATCACCAACTCACTTCCCAAGGCCCTTCTCCAACAGCTGCCTCCATTCAATGCATAGGGAGCAGTATCTACTAAATGAAATATGGACTAGAGTTAACTCATACCTGAGCTTGAGACCAGAGTTAGATCAGACATTGGATGATGTTGTGGGTAGAGATTTGGCAAAAAGTAGTTACTGGATGAACCTTCAACAAGAAGAGGAATGTGTAGCACTTGAACTAGAGGAAATGATTGTTGAAGATTTATTAAATGAAGTTATCTACTCACGAAATTCTTAG 2334 0.383 MGKHLLSSKKSTIQIQDNHPSCMWGILQILHYHHWHNIRNVFPHKKHYWGRHARYKRKHLLHNHGKDHQFGVAEAESRLDRQHSQKLNATIESSPKSSKKGSCTENSSKEKNSKDKYSGQNQATGEHALHLQKDGKIIEASLNQKLMEAKKFDRDISIKSEKHLDVLEVFRVEKGLFLEFYRDLDFGGKNSHQASNYKARLTKSGSFPLNSQMKNISLSTFEHKQNEIWAFPKREKLLVGTQAQKRSASGVAKDISFVKPLPLESTLSVDSAMKQKLSFSSSSYSQGSKGWNQMVLRRFKIIKQKIKHAIKEFKRSGHQTSVEAIHHRASSKYRIVNDEKEDSSSLDDGVIQEYIKNIISDKTEASDYDSNKHEVRLIRRSSSLNESLDRYAKLSEQSFSKDIKWYGSMSKSLKLANEDKDNMSGCAPKSSRRNLSVPNLESLGFLLHEALFDSNDIGITVETDIHVQRKSVSIPLDRDKSLDHLIETEMGETVGKGGKDVNPSPLSGKIIVKNDEEVSCNHRKDTHEPVVGDGSFPVPQEKVAINMTIYPNKEVMTTLESSCEGNKISYAEGKELNTRGSSMDELLTELPSISATAKGAKIKSDTNNDSNFKYVKDVLEYLGFMGNKDIQMWHTIDQPLNPSLLMVDLNATFCHEIESSEETINPYHYKLLFNVIKEVLLEIHERSPTHFPRPFSNSCLHSMHREQYLLNEIWTRVNSYLSLRPELDQTLDDVVGRDLAKSSYWMNLQQEEECVALELEEMIVEDLLNEVIYSRNS* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00802 777 MobiDBLite consensus disorder prediction 76 132 - -
Rops3g00802 777 MobiDBLite consensus disorder prediction 86 102 - -
Rops3g00802 777 Pfam Domain of unknown function (DUF4378) 612 770 IPR025486 -
Rops3g00802 777 PANTHER PROTEIN TRM32 1 774 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00802 Rops-Chr3 9776979 9780029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00802 139 763 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 28.193 2.95e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00802 - - gmx:100784103 825.083