Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00785 ATGATTGTGAAAGCAGCTGAAAAGGCAGAAACCCTCCATATTATTGATTTTGGTATCCTCTATGGTTTCCAATGGCCATTACTTATTAAGCTTTTATCAAATAGAGAGGGTGGACCTCCAAAACTGAGGATCACAGGGATAGAGTTTCCCGAACCTGGCTTTCGTCCAAGAGAGAGAATTGAGGAAACTGGTCGTCGTCTGGCTGACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTACAATGCCATAGCATCACGAAACTGGGAAATCATTCGAGTTGAAGACCTTAAAATTGAGAGCAATGAGGTAGTTGCTGTGAACAGTCTGATGAGGTTCAAGAATTTACTGGATGAGACTTTTGAAGTGAACAGTCCTAGAAATGCGGTTCTACATTTGATCAGGAAGATAAATCCCAATATTTTTACTCAGTTCATCGCTAATGGATCTTACAATGCCCCTTGGTTTGCCACGCGGTTTAAGGCGGCTCTATTCCATTTTTCTGCTTTTTATGATATGTTTGACACTGTCATGCCATGCAAAGACGAATCGAGGATGCTGATTGAGAGAGAAATATTGGGTCGGGAGGCAATGAATGTTATAGCATGTGAAGGTTTGGAGAGGGTTGAGAGGCCTGAGACATACAAAAAGTGGCAGGTTAGGAATACGAGGGTTGGTTTCAAGCAGCTCCCACTGAACCAGGAATTAATGGCCCAATTTAGGACTGAGTTAAGAGAAGGATACCACCGAGATTTTGTCTTTGATGAGGACAATAACTGGATGCTGCAAGGTTGGAAGGGCCGCGTTTTGTATGCTTCCACTTGTTGGGTTCCGGCATAG 837 0.4313 MIVKAAEKAETLHIIDFGILYGFQWPLLIKLLSNREGGPPKLRITGIEFPEPGFRPRERIEETGRRLADYCKRFNVPFEYNAIASRNWEIIRVEDLKIESNEVVAVNSLMRFKNLLDETFEVNSPRNAVLHLIRKINPNIFTQFIANGSYNAPWFATRFKAALFHFSAFYDMFDTVMPCKDESRMLIEREILGREAMNVIACEGLERVERPETYKKWQVRNTRVGFKQLPLNQELMAQFRTELREGYHRDFVFDEDNNWMLQGWKGRVLYASTCWVPA* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00785 278 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 271 IPR005202 -
Rops3g00785 278 Pfam GRAS domain family 2 275 IPR005202 -
Rops3g00785 278 ProSiteProfiles GRAS family profile. 1 276 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00785 Rops-Chr3 9585417 9586253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00785 1 278 GRAS Transcription Factor Family AT1G07520 60.000 4.43e-125 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops3g00785 GRAS 2.7e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00785 - - tpra:123918580 482.641