Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00784 ATGGATCCTAACTTTACTGCAGCTAGTGATTTCATAAACTGCTTCCAGTTTGGTGAAGATGGTACCATACTAGTCTCTGAGGATCCAAATCCAAATCAACAACAAGCAACAAACTGGGATGTTCACCAACAATATGGGAGGAGCTTTGTTGATGTGGACCCACCCCTTGAGGGTCAAGGTGCATCTGTGGCAACCATGTCCATGACCTCTGTGATGGATCATCCTTCTCTGCAAGACACTGACTTCTCAGAAACATTCAAGTTCATAAGCCAAGTCCTGATGGAAGAGAACATTGAACAGAGGCCATTTTGTGACTCCCTGAGCTTGCAAGTCACCGAGAAATCATTCCATGATGCTCTCATACACAAGTTACCTAATTCCCCCAATACACAACCGTTAGATATTAACGGCACCAACAGCCTTTTAGATGACAATTCTCCGTGTACCACAGTTTCTGTTCTTGGTGATCATGACTTTCATCATAACTCCCTTGCCATTTCTCATACACCCTTTCAACCTCCTTCTACTGGTGTTCGTGATGGTGTGATAGATGTGGAATCCTCAGTTAACAAACTGTTGGAACAAAATATTTTCACTGATACATACTTTGTCTCCCAATTTAAGAGAGGGTTAGAGGAAGTTAGCAACTTTCTTCCTCCTGGACCTCGGCTTGTGGCTGATCTAGAGTCAAAGGAAGAAGCAACCATTGTGGTTGGGGAGAATCCATTTGGGTTGAAGGGTGGTAGGAAGAATCATCAGCGTGAAGAAAGTGATACCCCTGAAGAAGGGAAAAATAACAAGCAATCAGCAGTTGGTGTTGTTGATGAGGGTGACTTATCAGATTTGTTTGATCGACTAATGCCTAGTGTGGAAAGTGAGCCAGGTGAAAAGCAACCTTCATCTGATGGAGGAAAGGCTCGTCCTAAGAAACAAGGCAGGAAGAAGGAAACTGTTGATTTGAGTACCCTTCTGCTTCTATGTTCACAAGCTTTGCATGCCAATGACAACAGGACTGCTAATGAGTTACTAAAGCAGATTAGGCAGCATTCTTCTCCCTTTGGGGATGCATCGCAGAGGTTGGCTCATTACTTTGCCAATGGCCTCGAAGCACGCTTGGTTGGTGATGGCGCCGGTACACAAGTATTTTATTCCTCTCCAAGCTCCAATAAGATCCTTACTGCTGAGTTTTTGAAAGGTTACCAAGCTTTTCTATCTACTTGCCCATTTAAGAAGTTTCAATTTTTCTTTGCAAATAAAATGATTGTGAAAGCAGCTGAAAAGGCAGATACCCTTCATATTATTGATTTTGGTATCCTATATGGTTTACAATGGCCATTACTTATTAAGCTTTTATCAAATAGAGAGGGTGGACCTCCCAAGCTGAGGATCACAGGGATAGAGTTTCCTGAAGCTGGCTTTCGTCCAACGGAAAGAATTGAGGAAACTGGTCAACGTTTGGCTAACTATTGCATGCGTTTCAATGTTCCCTTTGAGTACAATGCAATAGCATCACGGAACTGGGAAACTATTAGAGTTGAAGACCTTAAAATTAAGAGCAACGAGCTAGTTGCTGTGAACTGTCTGTTGAGGTTTAGGAACTTACTGGATGAGACTATTCAAGTGAACAGTCCTAGAAATGCAGTTCTTCATTTGATCAGGAAGATAGATCCCAATATTTTTACTCAGTCCATTCTTAATGGATCTTACAATGCCCCTTGGTTTGCCACGCGGTTTAAGGAGGCTCTATACCATTTTTCTGCTTTTTATGATATGTTTGACACTGTCATCCCATGCAAAAACGAATCGAGGATGCTGATTGAGAGAGAAATATTGGGTCGGGAGGCAATGAATGTTATCGCATGTGAAGGTTTGGAGAGGGTTGAGAGGCCTGAGACATACAAAAAGTGGCAGGTTAGGAATACGAGGGTTGGTTTCAAGCAGCTCCCACTGAACAAGGAATTAATGGCCAAATTTAGGACTGGGTTAAGGGAAGGGTACCACCAAGATTTTTTCTTTGATGAGGACAATAACTGGATGCTGCAAGGTTGGAAGGGCCGCGTTTTGTATGCTTCCACTTGTTGGGTGCTGGCATAG 2094 0.4284 MDPNFTAASDFINCFQFGEDGTILVSEDPNPNQQQATNWDVHQQYGRSFVDVDPPLEGQGASVATMSMTSVMDHPSLQDTDFSETFKFISQVLMEENIEQRPFCDSLSLQVTEKSFHDALIHKLPNSPNTQPLDINGTNSLLDDNSPCTTVSVLGDHDFHHNSLAISHTPFQPPSTGVRDGVIDVESSVNKLLEQNIFTDTYFVSQFKRGLEEVSNFLPPGPRLVADLESKEEATIVVGENPFGLKGGRKNHQREESDTPEEGKNNKQSAVGVVDEGDLSDLFDRLMPSVESEPGEKQPSSDGGKARPKKQGRKKETVDLSTLLLLCSQALHANDNRTANELLKQIRQHSSPFGDASQRLAHYFANGLEARLVGDGAGTQVFYSSPSSNKILTAEFLKGYQAFLSTCPFKKFQFFFANKMIVKAAEKADTLHIIDFGILYGLQWPLLIKLLSNREGGPPKLRITGIEFPEAGFRPTERIEETGQRLANYCMRFNVPFEYNAIASRNWETIRVEDLKIKSNELVAVNCLLRFRNLLDETIQVNSPRNAVLHLIRKIDPNIFTQSILNGSYNAPWFATRFKEALYHFSAFYDMFDTVIPCKNESRMLIEREILGREAMNVIACEGLERVERPETYKKWQVRNTRVGFKQLPLNKELMAKFRTGLREGYHQDFFFDEDNNWMLQGWKGRVLYASTCWVLA* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00784 697 MobiDBLite consensus disorder prediction 298 315 - -
Rops3g00784 697 MobiDBLite consensus disorder prediction 290 315 - -
Rops3g00784 697 MobiDBLite consensus disorder prediction 247 263 - -
Rops3g00784 697 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 264 690 IPR005202 -
Rops3g00784 697 MobiDBLite consensus disorder prediction 237 274 - -
Rops3g00784 697 ProSiteProfiles GRAS family profile. 311 695 IPR005202 -
Rops3g00784 697 Pfam GRAS domain family 321 694 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00784 Rops-Chr3 9575438 9577531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00784 85 695 GRAS Transcription Factor Family AT1G07530 46.512 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops3g00784 GRAS 5.2e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00784 - - tpra:123918580 821.617