Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00769 ATGGGGGAAGAAGTGAAATCGGATGAAGAGCGTGTGACAGAGTGGGAGAAAGGTCTCCCAAGCTTTCACGATCTCACTCCTCTTTCTCAGCTGTTGATCCCGCCGGAGCTTGCATCGGCGTTCAGCATCTCGCCGGAGCCCCGACGGACGCTGTTAGAGGTGAACCGTGCCTCACGCAACACGCTCTCCGTCATTCGCGGCGGCGGAACCGCACACCAAGCCTTTTCCTCCTCCAACAACCACCACGTGGAGGAGGAAGAAGAGGAAGAGGGTGAAGAAGAAACCGATCGTGACGGGTCGGGTTCTGATTCCCGGAAACAACGGAAGATCGATTGCACGGAGGAAGCTGATTCGGCGGTTCGAACGGCGGAAACCACCCTGAAACGGCCACGGTTGGTGTGGACCCCACAGCTTCATAAACGGTTTGTTGATGTTGTGGCTCACCTTGGGATCAAGAACGCTGTGCCAAAAACGATTATGCAGTTGATGAATGTTGAAGGGTTGACCCGTGAGAACGTGGCTAGTCACCTTCAAAAGTATCGTCTTTACTTGAAGAGGATGCAGGGTCTTTCAAATGAGGGTCCTTCTTCTTCTGATCAGCTTTTTGCTTCTACACCTGTGCCTCAGAGTTTGCATGATTCTGGTGCTGCTGCTAATAATAATAACCATTCACATTCTCATGGGAAATCACAGTTTCCTGTTCCTATTCCTATGCCTTATCCACCTCCCATGATGTCCATGCCTCTTCTTGGCATGCCACAGCCACATGGGTTACCATTACCTTCTTCTTCTGCTGCCTCCTCTTATCACTCTCATCCATTTAACATGTTTCACCACCCTCACCTTGCTCCTAATGGAGGAGGAGAATTCTGGCATGTTGCTTCTGATCTACCTAGACAGCTGATTCTGAAAACCATTGCAAAATTGAATAAAAGAGAGACTGAACAACAGTCAGCAAACATTTGTACCATCCTCTGGCTTTAA 984 0.497 MGEEVKSDEERVTEWEKGLPSFHDLTPLSQLLIPPELASAFSISPEPRRTLLEVNRASRNTLSVIRGGGTAHQAFSSSNNHHVEEEEEEEGEEETDRDGSGSDSRKQRKIDCTEEADSAVRTAETTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSGAAANNNNHSHSHGKSQFPVPIPMPYPPPMMSMPLLGMPQPHGLPLPSSSAASSYHSHPFNMFHHPHLAPNGGGEFWHVASDLPRQLILKTIAKLNKRETEQQSANICTILWL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00769 327 MobiDBLite consensus disorder prediction 98 122 - -
Rops3g00769 327 MobiDBLite consensus disorder prediction 69 122 - -
Rops3g00769 327 MobiDBLite consensus disorder prediction 190 236 - -
Rops3g00769 327 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 6 271 IPR044841 GO:0003700|GO:0006355
Rops3g00769 327 FunFam Two-component response regulator 125 188 - -
Rops3g00769 327 Gene3D - 125 188 - -
Rops3g00769 327 NCBIfam myb-like DNA-binding domain, SHAQKYF class 130 182 IPR006447 GO:0003677
Rops3g00769 327 SUPERFAMILY Homeodomain-like 126 186 IPR009057 -
Rops3g00769 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 134 185 IPR017930 -
Rops3g00769 327 Pfam Myb-like DNA-binding domain 133 181 IPR001005 -
Rops3g00769 327 MobiDBLite consensus disorder prediction 190 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00769 Rops-Chr3 9374008 9376395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00769 1 290 G2-like Transcription Factor Family AT3G46640 52.012 4.13e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops3g00769 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00769 - - aprc:113858844 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00769 3 9374008 9376395 Rops3g00769 3 9374008 9376395 ECH