Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00751 ATGGACTTCAAGCACAACATTCGTAATATGTCTGTTATTGCCCATGTTGATCATGGAAAATCAACTCTCACTGATTCTCTAGTGGCTGCTGCTGGTATTATTGCTCAAGAAGTTGCAGGTGATGTTCGGATGACAGATACACGCCAGGATGAAGCTGATCGTGGTATCACTATCAAGTCTACTGGTATCTCTCTTTATTATGAAATGTATGAAGATGCTCTCAAGAACTACAAGGGAGAACGCCAGGAAAATGAATACCTCATCAATCTCATCGACTCCCCTGGGCATGTGGACTTCTCTTCTGAGGTTACAGCCGCCCTTCGCATTACTGATGGGGCACTTGTGGTGGTGGATTGTGTAGAGGGTGTCTGTGTCCAAACTGAAACAGTTCTCCGTCAGGCTCTTGGTGAAAGGATCAGGCCTGTTCTGACTGTTAACAAGATGGATAGGTGTTTCCTCGAGCTTCAGGTGGATGGAGAGGAAGCTTACCAGACATTTCAAAGGGTTATTGATAATGCTAATGTGATTATGGCTACATATGAAGATCCCCTTCTTGGTGATGTTTAG 567 0.4444 MDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEADRGITIKSTGISLYYEMYEDALKNYKGERQENEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIDNANVIMATYEDPLLGDV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00751 188 FunFam Translation elongation factor 2 1 188 - -
Rops3g00751 188 NCBIfam small GTP-binding protein domain 7 158 IPR005225 GO:0005525
Rops3g00751 188 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 IPR031157 -
Rops3g00751 188 Gene3D - 1 186 IPR027417 -
Rops3g00751 188 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 182 - -
Rops3g00751 188 Pfam Elongation factor Tu GTP binding domain 5 169 IPR000795 GO:0003924|GO:0005525
Rops3g00751 188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 187 IPR027417 -
Rops3g00751 188 PRINTS GTP-binding elongation factor signature 89 99 IPR000795 GO:0003924|GO:0005525
Rops3g00751 188 PRINTS GTP-binding elongation factor signature 53 61 IPR000795 GO:0003924|GO:0005525
Rops3g00751 188 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Rops3g00751 188 PRINTS GTP-binding elongation factor signature 105 116 IPR000795 GO:0003924|GO:0005525
Rops3g00751 188 PRINTS GTP-binding elongation factor signature 141 150 IPR000795 GO:0003924|GO:0005525
Rops3g00751 188 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 188 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00751 Rops-Chr3 9227310 9231363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00751 1 188 Eukaryotic Initiation Factors Gene Family AT1G56070 91.489 3.70e-120 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00751 K03234 - sind:105166103 354.369