Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00749 ATGTCAAAGATGATCACAATTCACCAAAACACGAGACTCAGTTTGCTGAAGCAAATGGAACACGAGAAAACCCCTATCTTGGAAGAAAGGTCGATGCAGGAAATTGAGATACCCATTGCCTCTGACAGACTTGATGTTCTTCCTATGACTATGGAGTCATCTTGCAATTCTGTTTGTCCTTTTTCTAGACAGGAAAACAGTGTTGTGGCATCTAAAGAGTCATCAAAGTCAGCAAAGAAACTTTGTGGACTCATAGTTTTCTATGCTATTGTTATGGTTGTGGAAGTTATTGGTGGTATGAAAGCTCACAGCCTAGCTGTCATTAGTGATGCTGCACACTTGCTTTCTGATATTGCTGGATTCTCCATCTCTCTCTTTGCAGTGTGGGCTTCAAATTGGGAGGCAACACCCCATCAATCTTTTGGATACAATCGTCTTGAGGTTTTGGGTGCTCTTTTATCTGTGCAGTTAATTTGGGTCATATCTGGTTTTTTAATATATGAAGCCGTTGGTAGACTTGTTCACCCAAATGCAATGGTGAATGGAAAGCTCATGTTTGCAATTGCAGCATTTGGGTTTGTTCTTAACTTTATCATGGTTGTATGGCTTGGTCATGATCACAGTCATCATCATGGCTTCGGAGACTCAGATCATGGTCATAGCCATCATCAATGCTGTGGACACTCAGATCATGATCATGGGATGGAGGAGCTGCCTAAAATAACTGATGAGGAGAACCTCACCATGCTTTCAAGTAGTCAGAGAAATATCAATGTCTTGAACATAAATCTCCAAGGAGCCTATTTGCATGTCATGACTGATATGATTCAATCTATTGGAGTGATGATTGCTGGAGTCGTAGTATGGGTTGTACCAGAGTGGTTTATGGTTGACCTTATATGTACTCTTATATTCTCTGTTTTATCCTTAAGTACTACTCTGCCAATGCTTAGGAATATTTATGGCATTCTGATGGAGAGGACACCAAGTGAGATCAATATCATTCAGCTGGAAAATGGCCTCAGAAGTATTAAAGGAGTGCAGGATGTTCATGACTTACACATTTGGGCCATAACAGTTGGAAAAATTGTTTTGTCTTGCCATATAGTGGCTGAGCCTGGCATCAATTCCAGTGATTTACTTGGCACGATTAAGCATTACTGTGAAAAAACATATCAAATACAACATGTAACCGTACAAATTGAGTAA 1209 0.4003 MSKMITIHQNTRLSLLKQMEHEKTPILEERSMQEIEIPIASDRLDVLPMTMESSCNSVCPFSRQENSVVASKESSKSAKKLCGLIVFYAIVMVVEVIGGMKAHSLAVISDAAHLLSDIAGFSISLFAVWASNWEATPHQSFGYNRLEVLGALLSVQLIWVISGFLIYEAVGRLVHPNAMVNGKLMFAIAAFGFVLNFIMVVWLGHDHSHHHGFGDSDHGHSHHQCCGHSDHDHGMEELPKITDEENLTMLSSSQRNINVLNINLQGAYLHVMTDMIQSIGVMIAGVVVWVVPEWFMVDLICTLIFSVLSLSTTLPMLRNIYGILMERTPSEINIIQLENGLRSIKGVQDVHDLHIWAITVGKIVLSCHIVAEPGINSSDLLGTIKHYCEKTYQIQHVTVQIE* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00749 402 Pfam Cation efflux family 85 325 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Rops3g00749 402 Gene3D Cation efflux protein transmembrane domain 77 324 IPR027469 -
Rops3g00749 402 NCBIfam cation diffusion facilitator family transporter 79 402 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Rops3g00749 402 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 330 402 IPR036837 -
Rops3g00749 402 SUPERFAMILY Cation efflux protein transmembrane domain-like 78 326 IPR027469 -
Rops3g00749 402 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 52 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00749 Rops-Chr3 9212114 9214011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00749 19 402 Inorganic Solute Cotransporters AT2G29410 49.096 1.52e-122 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00749 K14689 - gmx:100777590 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00749 3 9212114 9214011 Rops3g00749 3 9212114 9214011 ECH