Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00743 ATGGATGCACACATGCCTGGCATGGAAGGGATGGCTCCACCACCATCCACTAATGGCACCATGATGATGGGCCATAAGATGCATGGCATGATGCACATGACCTTCTTCTGGGGGAAGGACGCGTTGATTCTCTTCGACAATTGGCCTGCAGGTAAAAGTGGCATGTATGCTTTGGCCTTGATCTTTGTTTTCGTCATGTCTGTTCTCATAGAATTGCTATCTCGAACCCAGTTCACTAAACCCGGTTCGGACCCTTTCGTGTCCGGTCTGGTTCAGACCCTCTTGCACGTTCTCAGGGTTGGGCTTTCTTACTTGGTCATGCTGGCACTCATGTCTTTCAATGGGGGTGTGTTCTTGGTTGCTTTGCTGGGTCATGCTTTGGGGTTCTTCTTCTGTAGCAGGGCTTTTAAAAAACCGCAACAAGATGAGGGTTTTGATCTTCCTCCAATCTCTTGTTAA 459 0.4858 MDAHMPGMEGMAPPPSTNGTMMMGHKMHGMMHMTFFWGKDALILFDNWPAGKSGMYALALIFVFVMSVLIELLSRTQFTKPGSDPFVSGLVQTLLHVLRVGLSYLVMLALMSFNGGVFLVALLGHALGFFFCSRAFKKPQQDEGFDLPPISC* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00743 152 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 22 142 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops3g00743 152 Pfam Ctr copper transporter family 85 132 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops3g00743 152 Pfam Ctr copper transporter family 33 76 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00743 Rops-Chr3 9122719 9123338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00743 34 152 Inorganic Solute Cotransporters AT5G59030 50.806 3.32e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00743 K14686 - gmx:100306175 231.106