Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00740 ATGGATGAACACATGCACGGGATGGAAGGGATGGCTCCAAAGCCATCTTCTAATGGCACCATGATGATGGGCCATCAGACCATGATGCACATGACATTCTTCTGGGGTAAGGACGCATTGGTTTTGTTCAACAACTGGCCTGCTGGTAAAGCTAACATGTACGTGTTGGCCTTGATCTTTGTCTTTGTGATGTCAATTCTCGTTGAGTTGCTATCTTGCACCCGGTTCATCAAGCCTGGTTCGAACGCTGTCGTGGTCGGTCTGGTTCAGACTCTGTTGCATGTTCTTAGGGTTGGGCTGTCTTACTTGGTCATGCTAGCACTCATGTCTTTCAATGGAGGAGTTTTCTTGGTTGCTTTGCTGGGTCATGCTTTGGGGTTCTTCTTCTGTACCAGGGCTTTTAAAAAACCGCAACAAGATGAGGGCTTTGATCTTCCTCCAATCTCTTGTTAA 453 0.4702 MDEHMHGMEGMAPKPSSNGTMMMGHQTMMHMTFFWGKDALVLFNNWPAGKANMYVLALIFVFVMSILVELLSCTRFIKPGSNAVVVGLVQTLLHVLRVGLSYLVMLALMSFNGGVFLVALLGHALGFFFCTRAFKKPQQDEGFDLPPISC* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00740 150 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 20 140 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops3g00740 150 Pfam Ctr copper transporter family 31 76 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops3g00740 150 Pfam Ctr copper transporter family 88 130 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00740 Rops-Chr3 9076003 9076455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00740 3 150 Inorganic Solute Cotransporters AT5G59030 42.424 6.06e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00740 K14686 - gmx:100306175 235.728