Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00739 ATGGATGAACACATGCACGGCATGGAAGGGATGGCTCCAAAGCCATCTTCTAATGGCACCATGATGATGGGCCATCAGACCATGATGCACATGACATTCTTCTGGGGTAAGGACGCATTGGTTTTGTTCAACAACTGGCCTGCTGGTAAAGCTAACATGTACGTGTTGGCCTTGATCTTTGTCTTTGTGATGTCAATTCTCGTTGAGTTGCTATCTCGCACCCGGTTCATCAAGCCCGGTTCGAACCCTGTCGTGGCCGGTCTGGTTCAGACCCTGTTGCATGTACTTAGGGTTGGACTGTCTTACTTGGTCATGCTAGCACTCATGTCTTTCAATGGAGGAGTTTTCTTGGTTGCTTTGCTGGGTCATGCTTTGGGGTTCTTCTTCTGTACCAGGGCCTTTAAAAAACCGCAACAAGATGAGGGCTTTGATCTTCCTCCAATCTCTTGTTAA 453 0.479 MDEHMHGMEGMAPKPSSNGTMMMGHQTMMHMTFFWGKDALVLFNNWPAGKANMYVLALIFVFVMSILVELLSRTRFIKPGSNPVVAGLVQTLLHVLRVGLSYLVMLALMSFNGGVFLVALLGHALGFFFCTRAFKKPQQDEGFDLPPISC* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00739 150 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 20 140 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops3g00739 150 Pfam Ctr copper transporter family 84 130 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops3g00739 150 Pfam Ctr copper transporter family 31 73 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00739 Rops-Chr3 9065391 9065843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00739 3 150 Inorganic Solute Cotransporters AT5G59030 41.818 6.34e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00739 K14686 - gmx:100306175 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00739 3 9065391 9065843 Rops3g00739 3 9065391 9065843 ECH