Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00738 ATGGATGATCACATGCACGGCATGGAAGGGATGGCTCCAAAGCCATCTTCTAATGGTACCATGATGATGGGTCATAAGATGCATGGCATGATGCACATGACATTCTTCTGGGGGAAGGATGCGTTGATTCTCTTCGACAATTGGCCTGCGGGTAATGGTGGCATGTATGCTTTGGCTTTGATCTTTGTGTTTGTTATGTCTGTTCTTGTAGAGTTGCTATCCCGAACCAGGTTCATTAAACCCGGTTCGAACCCTGTCGTGGCCGGTTTGGTTCAGACCCTGTTGCACCTGCTTAGGGTTGGGCTGTCTTATTTGGTTATGTTAGCACTCATGTCTTTCAATGGGGGAGTGTTCCTGGCTGCTGTGCTTGGACATGCTTTGGGATTCTTCTTCCGTAGCAGGGCTTTTGAAAAACCGAACCATCATGAGGGTTTTGATCTTCCTCCAATGTCTTGTTAA 459 0.4728 MDDHMHGMEGMAPKPSSNGTMMMGHKMHGMMHMTFFWGKDALILFDNWPAGNGGMYALALIFVFVMSVLVELLSRTRFIKPGSNPVVAGLVQTLLHLLRVGLSYLVMLALMSFNGGVFLAAVLGHALGFFFRSRAFEKPNHHEGFDLPPMSC* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00738 152 Pfam Ctr copper transporter family 33 75 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops3g00738 152 Pfam Ctr copper transporter family 88 131 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops3g00738 152 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 22 142 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00738 Rops-Chr3 9057645 9058412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00738 25 143 Inorganic Solute Cotransporters AT5G59040 51.667 7.87e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00738 K14686 - gmx:100306175 228.024