Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00732 ATGGCTTCCATAGCACTCACCACCACCGCCCTCCCCTCTCTCCGCCTCCGCTCTTCCCCCAAATCCTCACCACTCCGCCATTCCACCACCACTTTCAAACCCCTCAAACAAAACCGCCACCTTTCCATTTCTTCATTCCCATCCTTCCCACTCTCCAATCTAAAACACCGAACCCTCACCGTTCGAGCCTCTTCCGCATCAGCCTCTGTAACTCCGGCACCGGCTCCGCCTCAGCCATGGCAGGGCGCTGCCATAAAACCCCTTTTAGCTTCCATAGCCACTGGCGTTATCCTCTGGTTCTGTCCCGTTCCCGACGGTGTCTCCCGTAACGCGTGGCAATTATTGGCGATTTTCTTAGGCACAATCGTCGGCATTATCACACAACCACTCCCACTTGGTGCCGTCGCTATTTTGGGTTTGGGCGTTTCGGTTCTCACTAAAACCCTACCTTTCGTTGCAGCATTCTCCGGCTTCGGAGATCCAATCCCATGGCTCATTTGCCTTGCCTTCTTCTTCGCTAAGGGATTCATCAAAACCGGTCTCGGAAATCGTGTGGCTTATCAATTTGTTTCCCTTTTTGGTAGCTCTTCGTTAGGGTTAGGTTATAGTTTGGTTTTCAGTGAGGCCCTTTTGGCCCCTGCAATTCCTTCTGTTTCCGCAAGATCTGGTGGGATTTTTCTTCCTTTGGTTAAGTCACTCTGTGTGGCTTGTGGTAGTAACGCCGGCGATGGAACGGAGAATAGACTTGGGTCGTGGTTGATGTTAACTTGCTTTCAGACTTCGGTGATTTCGTCGGCGATGTTTCTGACTGCAATGGCGGCGAATCCGCTTTGCGCCACTCTCACTCAGAATTCCATTAACCAGACTATTGGGTGGTTGGATTGGGCAAAGGCTGCGATTGTGCCCGGTTTTGTGTCGTTGTTGGTGGTGCCGTTGATCTTGTATATTATCTACCCTCCTACCTTGAAAAATAGCCCTGATGCACCCAAGCTTGCTAGGGAAAAGTTGCTGAAAATGGGACCCATGTCTGCTCACGAGAAGATCATGACTGCTACTCTGCTTGTTACGGTGGGACTTTGGGTTTTTGGAGGGCTTCTTAATATAGATGCTGTAACTGCTGCCATTCTTGGATTGGCTGTACTGCTTGTCACGGGGGTTGTAACATGGAAGGAGTGCTTAGCTGAGGGAGTTGCCTGGGATACTCTCACGTGGTTTGCTGCCCTCATTGCAATGGCTGGGTATTTGAACAAATATGGTCTCATTTCTTGGTTCAGTCAAACCGTAGTCAAGTTTGTTGGTGGATTGGGGCTCTCGTGGCAACTGTCTTTTGGAATTCTGGTCCTTCTTTACTTCTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTGGGGACTCCACCATACTTTGGAGCCATGGTGCTGTCCTTCCTCTCCAACCTTATGGGCGGCCTTACTCATTATGGGATTGGGTCAGCTCCAGTGTATTTCGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGCTATGGATTCCTCATAAGTATTGTTAACATTGTGATCTGGCTTGGTCTTGGAGGAGTTTGGTGGAAATTCATTGGCTTGTGGTAA 1653 0.4949 MASIALTTTALPSLRLRSSPKSSPLRHSTTTFKPLKQNRHLSISSFPSFPLSNLKHRTLTVRASSASASVTPAPAPPQPWQGAAIKPLLASIATGVILWFCPVPDGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFVAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARSGGIFLPLVKSLCVACGSNAGDGTENRLGSWLMLTCFQTSVISSAMFLTAMAANPLCATLTQNSINQTIGWLDWAKAAIVPGFVSLLVVPLILYIIYPPTLKNSPDAPKLAREKLLKMGPMSAHEKIMTATLLVTVGLWVFGGLLNIDAVTAAILGLAVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPYFGAMVLSFLSNLMGGLTHYGIGSAPVYFGANYVPLAKWWGYGFLISIVNIVIWLGLGGVWWKFIGLW* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00732 550 NCBIfam DASS family sodium-coupled anion symporter 102 544 IPR001898 GO:0016020|GO:0022857|GO:0055085
Rops3g00732 550 CDD ArsB_NhaD_permease 122 544 - -
Rops3g00732 550 Pfam Sodium:sulfate symporter transmembrane region 87 550 IPR001898 GO:0016020|GO:0022857|GO:0055085
Rops3g00732 550 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 49 550 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00732 Rops-Chr3 8978203 8982388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00732 1 549 Antiporters AT5G12860 78.853 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00732 - - gmx:100793559 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00732 3 8978203 8982388 Rops3g00732 3 8978203 8982388 ECH