Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00727 ATGAAGACCATGGAAACTTTAGAGAGAGACCTAAAGAACATGAGGGAGTATTTTGAGAGTAGAAAGACAAATGAAGCATCTTGGAGAGAATCACAACTCAAAGGGTTGCGTCGTTTCCTCGTGGAAAAAGAGGAAGATATCTTGAAGGCTCTCATGCAAGATTTGGGGAAACACCAAATTGAAGCTTTTAGAGACGAGATAGGAACGTTAATGAAGACCTTAAATCTTGCATTGAAGAATTTGAAAGATTGGATGTCAGGTAAAAAGGCTAAATTACCACAAATAGCATTGCTTACAAGTGCAGAAATTGTTCCAGAGCCTCTTGGTCTAGTCCTCATTCTTTCATCTTGGAATTTCCCCTTTGGACTGTCCCTAGAGCCACTGATAGGAGCAGTAGCTGCAGGAAATGCAGTAGTCTTAAAGCCTTCAGAGTTGTCTCCTGCATGTTCTTCACTACTTGCCTCTAGTCTTTCAACTTACTTAGACAGTGAAGCCATCAATGTTGTAGAAGGGGGACCAGAGGAATCTGAGCAATTACTACAGCAAAGATGGGACAAAATCTTCTTTACAGGAAGTGCATGCGTGGGGAGGATTGTGATGTCTGCAGCTGTGAAGTTTCTGACGCCTGTTACTCTGGAGTTGGGTGGAAAATGCCCTGCAGTTGTGGACTCTCTTTCATCTTCATGGGATATAGAGGTAACTGTGAAGCGGATTCTTGTGGGTAAATTTGGTGCTTGTGCTGGTCAAGCATGTATAGCAATTGACTATGTCCTTGTGGAAAAAAGATACTGTTCAAGACTGGTGGAATTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGAACCCAAAACAATCCAACGCTGTTGCAAGGATAGTGAATAAAAGACACTTCTTTAGATTGAAGAATCTTCTTAATGACCGAAAGGTCAAAGATTCTGTGGTTTATGGTGGCTCAATGGATGAAGATAAATTATTTATTGAGCCAATGATATTGGTGGATCCCCCACTTGATGCAGCTATCATGTCAGAAGAAATTTTTGGCCCATTGCTTCCAATTATTACGCTGGAGAAGATCGAGGACAGTATTAAATTCATAAACTCTAGGCCTAAGCCTCTTGCCCTTTATGTTTTCACCAAAAACCAAACACTGCAAAGCAGAATGTTATCTGAAACATCATCTGGCAGCTTGACTTTCAACGATGCAATTCTACAATATGCAGCAGATACTCTCCCGTTTGGAGGAGTAGGTGAAAGTGGGTTTGGCATGTACCATGGGAAGTTCTCGTTTGACACATTCAGCCACCAAAAGACTGTTCTCAGAAGAAGTTTCCTAACTGATTTTTGGTATAGATATCCTCCATGGACACTAAATAAGCTTCAACTACTTGAGGCCAAATGTGGGCAAAGTAGCATTTTGAATGCACTGGTTGGTGAAGACAGAACAATTGTCAGCCCCATCAGTGGCACTACACGTGATGCCATTGATACCGAATTCACTGGAGCAGATGGCCAGGGTGTTGCATTTCGTGCTATTCGTCGTTCTGATGTTGTTGCCCTTGTCAATGAGGCCATGGCTGGTATCACAGAACAGGCCGTTATAAGGCCGCCTACATTTGTGTTCTTTGTCAATGATGCAAAACTGTTTCCAGAGACTTACCAGCGGTACATGGAGAAGCAGCTGCATACAGATGCAGGTTTTCCTGGTACCCCGATTCGACTTTTGTGGCGCAACAGAAGGAAAATGTGA 1749 0.4254 MKTMETLERDLKNMREYFESRKTNEASWRESQLKGLRRFLVEKEEDILKALMQDLGKHQIEAFRDEIGTLMKTLNLALKNLKDWMSGKKAKLPQIALLTSAEIVPEPLGLVLILSSWNFPFGLSLEPLIGAVAAGNAVVLKPSELSPACSSLLASSLSTYLDSEAINVVEGGPEESEQLLQQRWDKIFFTGSACVGRIVMSAAVKFLTPVTLELGGKCPAVVDSLSSSWDIEVTVKRILVGKFGACAGQACIAIDYVLVEKRYCSRLVELMKVWIKKMFGENPKQSNAVARIVNKRHFFRLKNLLNDRKVKDSVVYGGSMDEDKLFIEPMILVDPPLDAAIMSEEIFGPLLPIITLEKIEDSIKFINSRPKPLALYVFTKNQTLQSRMLSETSSGSLTFNDAILQYAADTLPFGGVGESGFGMYHGKFSFDTFSHQKTVLRRSFLTDFWYRYPPWTLNKLQLLEAKCGQSSILNALVGEDRTIVSPISGTTRDAIDTEFTGADGQGVAFRAIRRSDVVALVNEAMAGITEQAVIRPPTFVFFVNDAKLFPETYQRYMEKQLHTDAGFPGTPIRLLWRNRRKM* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00727 582 Gene3D - 467 500 IPR027417 -
Rops3g00727 582 Coils Coil 41 61 - -
Rops3g00727 582 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Rops3g00727 582 FunFam Aldehyde dehydrogenase 216 419 - -
Rops3g00727 582 SUPERFAMILY ALDH-like 10 456 IPR016161 GO:0016491
Rops3g00727 582 PANTHER ALDEHYDE DEHYDROGENASE 3 474 IPR012394 GO:0006081
Rops3g00727 582 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 530 577 IPR032859 -
Rops3g00727 582 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Rops3g00727 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 468 581 IPR027417 -
Rops3g00727 582 FunFam Aldehyde dehydrogenase 15 219 - -
Rops3g00727 582 Pfam Aldehyde dehydrogenase family 4 439 IPR015590 GO:0016491
Rops3g00727 582 Gene3D - 523 580 IPR015946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00727 Rops-Chr3 8911335 8920720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00727 5 463 Aldehyde Dehydrogenase Gene Family AT4G36250 55.120 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00727 K00128 - gmx:100817701 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00820 7 10933862 10937636 Rops3g00727 3 8911335 8920720 PCT