Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00726 ATGAAGACCATGGAAACTTTAGAGAGAGACCTAAAGAACATGAGGGAGTATTTTGAGAGTAGAAAGACAAATGAAGCATCTTGGAGAGAATCACAACTCAAAGGGTTGCGTCGTTTCCTCGTGGAAAAAGAGGAAGATATCTTGAAGGCTCTCATGCAAGATTTGGGGAAACACCAAATTGAAGCTTTTAGAGACGAGATAGGAAAGTTAATGAAGACCTTAAATCTTGCGTTGAAGAATTTGAAAGATTGGATGTCATGTAAAAAGGCTAAATTGCCACAAATAGCATTGCTCACAAGTGCAGAAATTGTTCCAGAGCCTCTTGGTCTAGTCCTCATTCTTTCATCTTGGAATTTCCCCTTTGGACTGTCCCTAGAGCCACTGATAGGAGCAGTAGCTGCTGGAAATGCAGTAGTCTTAAAGCCTTCAGAGTTGTCCCCTGCATGTTCTTCACTGCTTGCCTCTAGTCTTTCAACTTACTTAGACAATGAAGCCATCAAGGTTATAGAAGGGGGACCAGAGGAATCTGAGCAATTACTACAGCAAAGATGGGACAAAATCTTCTTTACAGGAAGTGCATGTGTGGGGAGGATTGTGATGTCTGCAGCCGTGAAGTTTCTGACTCCTGTTACTCTAGAGTTGGGTGGAAAATGCCCTGCAGTTGTGGACTCTCTTTCATTTTCATGGGATATAGAGGTGACTGTGAAGCGGATTCTTGTGGGTAAATTTGGTGCTTGTGCTGGTCAAGCATGTATAGCAATTGACTATGTCCTTGTGGAAAAAAGATACTGTTCAAGACTGGTGGAATTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGAACCCAAAACAATCCAACACTGTTGCAAGGATAGTGAATAAAAGACACTTCTTTAGATTGAAGAATCTTCTTAATGACCGAAAGGTCAAAGATTCTGTGGTTTATGGTGGCTCAATGGATGAAGATAAATTATTTATTGAGCCAATGATATTGGTGGATCCCCCACTTGATGCAGCTATCATGTCAGAAGAAATTTTTGGCCCATTGCTTCCAATTATTACGCTGGAGAAGATCGAGGACAGTATTAAATTCATAAACTCTAGGCCTAAGCCTCTTGCCCTTTATGTTTTCACCAAAAACCAAACACTGCAAAGCAGAATGTTATCTGAGACATCATCTGGCAGCTTGACTTTCAACGATGCAATTCTACAATATGCAGCAGATACTCTCCCATTTGGAGGAGTAGGTGAAAGTGGGTTTGGCATGTACCATGGGAAGTTCTCCTTCGACACATTCAGCCACCAAAAGACTGTTGTCAGAAGAAGTTTCCTAACTGATTTTTGGTATAGATATCCTCCATGGACACTAAATAAGCTTCAACTACTTGAGGTCTCTTACAATTATGATTATCTGGGATTGCTCCTTGTCTTGTTGGGCTTAAAGAGACCATCAAAATACAGATCATCATATTTTGCTGCGGATTTAAGTCCTATGTAG 1500 0.4087 MKTMETLERDLKNMREYFESRKTNEASWRESQLKGLRRFLVEKEEDILKALMQDLGKHQIEAFRDEIGKLMKTLNLALKNLKDWMSCKKAKLPQIALLTSAEIVPEPLGLVLILSSWNFPFGLSLEPLIGAVAAGNAVVLKPSELSPACSSLLASSLSTYLDNEAIKVIEGGPEESEQLLQQRWDKIFFTGSACVGRIVMSAAVKFLTPVTLELGGKCPAVVDSLSFSWDIEVTVKRILVGKFGACAGQACIAIDYVLVEKRYCSRLVELMKVWIKKMFGENPKQSNTVARIVNKRHFFRLKNLLNDRKVKDSVVYGGSMDEDKLFIEPMILVDPPLDAAIMSEEIFGPLLPIITLEKIEDSIKFINSRPKPLALYVFTKNQTLQSRMLSETSSGSLTFNDAILQYAADTLPFGGVGESGFGMYHGKFSFDTFSHQKTVVRRSFLTDFWYRYPPWTLNKLQLLEVSYNYDYLGLLLVLLGLKRPSKYRSSYFAADLSPM* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00726 499 PANTHER ALDEHYDE DEHYDROGENASE 3 474 IPR012394 GO:0006081
Rops3g00726 499 FunFam Aldehyde dehydrogenase 15 222 - -
Rops3g00726 499 Pfam Aldehyde dehydrogenase family 4 439 IPR015590 GO:0016491
Rops3g00726 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Rops3g00726 499 SUPERFAMILY ALDH-like 10 456 IPR016161 GO:0016491
Rops3g00726 499 Coils Coil 41 61 - -
Rops3g00726 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Rops3g00726 499 FunFam Aldehyde dehydrogenase 216 419 - -
Rops3g00726 499 PIRSF ALDH 1 475 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00726 Rops-Chr3 8888205 8891919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00726 5 483 Aldehyde Dehydrogenase Gene Family AT4G36250 54.906 0.0 568