Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00722 ATGATGAGTTGGAACCCGCACATGGAGGTCCATTACAATAACATCAGCTATCCCTATAGTACTGCTGGAAGCTTTATTGAATATTTTGAAGGTCTCACCTATGAACATGTCAACTTCATTTTTTCCGGTGGATCACATGCTCAGGAGAGTTCGTACCCTTCAAATTCAGGCTTTTACAAATTTGGACTGTCTGAACCTGAGAATACTTCCTACTACCGTTACAGTCATGGTTATGAGGTAAATCATCACGAACCACTGGTGGATGAATATAGGAGGCCTTCAGAAAACTCGTCGACAATCAATGAGCAGACAGCAGCTGTAAGCACAGAATGGGGAGAAGGTCGAAGCACTGACACACAAGACAATTCTATTGAATGTCCACGAAGACATCATAGTAATTCCAATGATTATCAGGTCATTTGGCAAGACAATATTGATCCCGACAACATGACCTATGAGGAACTACTTGAATTAGGTGAGGCTGTTGGAACTCAAAGCCGTGGTCTCACCCAAGAACAGATCTCCTTGCTTCCAGTTTCAAAGTACAAGTGTGGGTTCTTCATGAGGAAGAAGTCACGGGATGAGAGATGTGTGATTTGCCAGATGGAATATAAAAGAGGGGACAAGCGGATCACTTTACCATGTAAACATGTCTATCATGCTAATTGTGGGAACAGATGGCTTAGCATCAATAAGGCTTGCCCTATATGTTTCACGGAAGTGTTTGCCGACAAGTCAAAACACAAATAA 750 0.4227 MMSWNPHMEVHYNNISYPYSTAGSFIEYFEGLTYEHVNFIFSGGSHAQESSYPSNSGFYKFGLSEPENTSYYRYSHGYEVNHHEPLVDEYRRPSENSSTINEQTAAVSTEWGEGRSTDTQDNSIECPRRHHSNSNDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISLLPVSKYKCGFFMRKKSRDERCVICQMEYKRGDKRITLPCKHVYHANCGNRWLSINKACPICFTEVFADKSKHK* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00722 249 MobiDBLite consensus disorder prediction 92 121 - -
Rops3g00722 249 FunFam E3 ubiquitin ligase BIG BROTHER 159 242 - -
Rops3g00722 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 159 242 IPR013083 -
Rops3g00722 249 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 243 IPR033276 GO:0004842|GO:0016567|GO:0046621
Rops3g00722 249 Pfam Ring finger domain 196 237 IPR001841 -
Rops3g00722 249 SUPERFAMILY RING/U-box 193 244 - -
Rops3g00722 249 SMART ring_2 197 237 IPR001841 -
Rops3g00722 249 MobiDBLite consensus disorder prediction 92 130 - -
Rops3g00722 249 ProSiteProfiles Zinc finger RING-type profile. 197 237 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00722 Rops-Chr3 8828358 8833921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00722 6 248 C3H Transcription Factor Family AT3G63530 42.972 4.51e-65 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00722 K19045 - gmx:100793907 498.434