Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00712 ATGGATTCAGCAACATCAGCTTCACCACCATTGGAGCTGAACCTCGACAACCTTAAAGCACTCAAAGTCCTCGGAAAAGGTGCCATGGGGACAGTCTTCCTCGTCCACGACACCAACAACACCACAACCCCCACCCCCTTCGCCCTCAAAGTCGTCGACAAAACCTGCATCCACGCCAAACTCGACGCTGAACGCCGTGCACGGTGGGAAATTCAGGTCCTCTCCACCCTCTCACACACGTTCCTCCCTTCCCTAATTGGCACATTCGAATCCCCACAGTTCCTCGCGTGGGCACTACCTTATTGCCCCGGTGGTGACCTTAACGTCCTCCGTTACCGCCAAAACGACCGCGTTTTCTCCCCCACCGTTATTCGGTTCTACATCGCTGAGATCCTCTGCGCTCTCGAACACCTTCATTCCATGGGCATCGCTTACCGTGACTTAAAACCTGAAAATGTCCTTATACAACATTCCGGCCACGTCACACTCACCGATTTCGATCTCTCTCGAAAACTCAACCCTAAAACCATCAAAACCCTCGTTTCTTCAATTCCTTTACCCGATTCGAAGCCTCCAGAACCTCGCCGGAAACACCGCCGGAATTTCACCCGGTGGATTCCCCGCCTTCCGCCTGATACCATTCATCACCATAAAAACGGTTTAAAGAAGGCGAAATCCGCACGAGTCAGCCCGGTGAGTCGACGGAAACCGAGTTTCTCCAACGGCGAACGGTCCAATTCTTTCGTAGGAACGGAGGAGTATGTTTCGCCGGAGGTAGTTCGCGGCGAGGGACACGAGTTCGCCGTTGATTGGTGGGCCCTGGGAATATTAACATACGAAATGCTGTACGGTACGACACCGTTTAAGGGGAAGAGTCGGAAGGAAACGTTCCGAAACGTGTTGACGAAGCCGCCGGAGTTCGTCGGAAAACGGTCGGCGTTAACGGACCTTATCGAGAAGTTGTTGGAAAAAGACCCTACGAAACGATTGGGTTATGCACGTGGCGCTGTGGAGATTAAGGAGCACGAGTTCTTCAGAGGGGTCCACTGGGACCTATTGACGGAGGTTGTGCGGCCGCCGTTTATTCCGTCAAGAGACGACGTCGCCGGAGAGCCGCCGGAGAAATTGTCTGGCGGCGTGGACGTTAGGGATTACTTCCAGAGATTGAATTCGCCACCGTCGTTGCCGCCTTCGCCGTCACCGTCACCGTCACCGTCTTGCAAGTTTAAGAGGAATGTTTCTCTGACAGAATTCTAA 1257 0.5346 MDSATSASPPLELNLDNLKALKVLGKGAMGTVFLVHDTNNTTTPTPFALKVVDKTCIHAKLDAERRARWEIQVLSTLSHTFLPSLIGTFESPQFLAWALPYCPGGDLNVLRYRQNDRVFSPTVIRFYIAEILCALEHLHSMGIAYRDLKPENVLIQHSGHVTLTDFDLSRKLNPKTIKTLVSSIPLPDSKPPEPRRKHRRNFTRWIPRLPPDTIHHHKNGLKKAKSARVSPVSRRKPSFSNGERSNSFVGTEEYVSPEVVRGEGHEFAVDWWALGILTYEMLYGTTPFKGKSRKETFRNVLTKPPEFVGKRSALTDLIEKLLEKDPTKRLGYARGAVEIKEHEFFRGVHWDLLTEVVRPPFIPSRDDVAGEPPEKLSGGVDVRDYFQRLNSPPSLPPSPSPSPSPSCKFKRNVSLTEF* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00712 418 MobiDBLite consensus disorder prediction 363 382 - -
Rops3g00712 418 ProSitePatterns Protein kinases ATP-binding region signature. 24 50 IPR017441 GO:0005524
Rops3g00712 418 FunFam Serine/threonine-protein kinase OXI1 106 174 - -
Rops3g00712 418 FunFam Serine/threonine-protein kinase UCNL 18 105 - -
Rops3g00712 418 Gene3D Transferase(Phosphotransferase) domain 1 242 364 - -
Rops3g00712 418 PANTHER FLIPPASE KINASE 1-RELATED 12 366 - -
Rops3g00712 418 SMART serkin_6 18 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g00712 418 MobiDBLite consensus disorder prediction 387 418 - -
Rops3g00712 418 Pfam Protein kinase domain 20 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g00712 418 Pfam Protein kinase domain 240 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g00712 418 Gene3D Phosphorylase Kinase; domain 1 18 105 - -
Rops3g00712 418 Gene3D Transferase(Phosphotransferase) domain 1 106 179 - -
Rops3g00712 418 MobiDBLite consensus disorder prediction 233 247 - -
Rops3g00712 418 FunFam Serine/threonine-protein kinase OXI1 243 364 - -
Rops3g00712 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Rops3g00712 418 ProSiteProfiles Protein kinase domain profile. 18 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g00712 418 MobiDBLite consensus disorder prediction 216 247 - -
Rops3g00712 418 SUPERFAMILY Protein kinase-like (PK-like) 15 404 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00712 Rops-Chr3 8665854 8667338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00712 13 418 AGC Kinase Gene Family AT3G20830 60.628 7.94e-167 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops3g00712 Pkinase 2.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00712 - - gmx:100785281 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00453 7 5647867 5649398 Rops3g00712 3 8665854 8667338 PCT