Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00694 ATGGATCCAGAAGTATCAACAGAGGATCAGTTCTCCGAGTTACATCCTTCCTTACCAGAAAACACCAGAATTGGAATAGTAGGTGCCGGTCCAAGTGGCTTATCAGCTGCTTATGCACTAGCCAGACTTGGTTACAAGAATGTCACAGTTTTGGAGAAACATCACATGGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTGGGTGGGCAAGTTCTTGCTGCAAGCAGTGCTCCAGTCATCTTTCACTTGGCAAAAGAGACAGGATCTGCACTAGAAGAATTGGACTCACACAAGCTTGCTGTTATTGACCCTTCCTCTGGAGAATATCAAGATATTCAAGTAGCTGATGATTATGTATCTATTACGTCTCTTACATTGGAAATCCAAGAAAAGGTGAAGAATAATGGTCGAATTGGGGTCCATGCTGTCAGTGATGTTGCAGCAGACTTAACTCCAGGGTATCTTAAACTTCATGGAATCAAATCCATTCCTAAATCTGTGGCTTATGGTTACACTGCTTCAGGATATGGGTTTATTCAAGACATGCCTTATGCATACCTTCATGAATTTACTAGAACATCCATGGCTGGAAAAATTAGAAGATTTAAAGAGTGCAAAGAAGAAGTAATGGATGCAAGTGCCCTTGAAAAGGAATTGTTCAGCAAAGTGGAGACAAATGACTACTACACCACTGTTTTAAAGATCAGATGGCTAGAACATTTGCCTGTTGGATTTTATTATTTTAGTGAATATTTGGAAGATCCTAGCACAATTGGAAATCCAGTTGCAATGCAGAAGTTTTATGCTGACACTAACATATTCTTGTTCTGGTCCTATGGCAACTCTATTGATATTAAGGGACCAACTGTCATGGAGCTTGCAATCCAAGCAACAAAAGCCATGGGGGGAGAAGTTGAGAATGTCATCCTTCAACGCTGTTTTAAGTATTTTCCTCATGTTGGCAGCCAAGATATGAAAGAGGGATTCTATGAACAATTGGAATCAAAGCTACAAGGTTCAAGGAATACTTATTATGTAGGTGGACTTATGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTCTGATTTGCAAGAACTTTGCAAATAAAGCATGTTTTATGCAGAATTTGTTTCCCTTGCAAACTGAGTGCCAGAAGAAGAATCCTAAAGAATTAGGTGAATTGCAACAAGTGCAATTTCCTGATTTGCCTACTTTGAACAGCTACTTAAAGTACTGGGGAACTCATCCAATCACTCAAAACAGGACTCTTTATACTTGGATTAATGAAAAAGGGATTCCAGTATGCCAAAGGACCTATAGAGAACAACATTTTAATTCTTTTTGCATTGCTCATAAGCTCTTAACAAGCCAAAAGCCATTTATCAAGCCTGGTGACAGAGTTCTCCTGGTCTATGTCCCTGGTTTGGATTTTGTTGATGCCATCTTTGGATGCCTAAGAGCTAAAGTCTTACCGGTCCCCATTCTTCCCCCAGATCCCATGCAAAGAAGTGGACAAGCACTAATGAAAATTGAAAATATTGCCAAGTCATGTGGCATAACAGTAATTTTATCAACAGTAGCTTATCACTTTGTAGTCCGAGCAGGATCAACTGGTGATGCCAAAGGAGTCATGATCTCTCATGGTGGGCTTATTCACAATGTGAAGTTGATGCGAAGAAGATACAAAAGCACCTCAAGGACAATGCCAGTAAGCTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGGGGACTTTTCACATCTCTTGTTAGTGGTGGATCTGCAGTTTTATTTTCCCCAATGACATTTATCAAGAATCGACTCTTATGGCTTGAAACTATCAGCAAGTATCAAGCAACTCATAGTGCTGGACCTAACTTTGCCTTTGAGTTGGTTATTAGAAGACTGGAGTCCACCAAGGATAAGCTTCAGAATTTAGACCTTTCATCCTTGGTTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACCTTGAAAAGATTCATTGAGCTGACCAGTCCTTATGGTTTATCTCAAAAGGTGATGGCTCCTGGATATGGCTTGGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGTAAGCCTATCATTGTTGATTGGCAGGGAAGAGTTTGTTGTGGGTATGTTCATCCAGAAGATGTAGATGTTGACATCAGAATAGTTGATCCAGAAACTTGTGAAGAACTTCAGGAAGATGGAAAGGAGGGAGAAATCTGGATTAGTAGTCCTAGCGCAGGAATAGGATATTGGGGAAGGGAAGAATTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAATATTTACTCAGCAGATGTTGAAAAGACAGTTGAGACTTCATCTGAATTTCTTCGTCCTGGTTGCTGTGCTGTCATTGGTGTCCCTGAGGAAATTCTATCAGCAAAGGGTATTTCCATTCCAGATGGTTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAAGTAAGGGATGGTAAAACAGTTAGCAAAGAGGTGATTGAGAATATTAAGACAAGTGTGGCAGAAGAACATGGAGTCAGTGTTGCTTCTGTCAAGTTGGTCAAGGCTAGAACCATCAGCAAAACAACATCAGGAAAAATCAAAAGATTTGAATGTATCAAACAATTCAAAGATGATACATTGAACTTGGTGCTACTAAGTCCAAAACCTATTTTGACTAAGAAATCTTTGGTAAGGTCATTTACTGCAGGAACATGCAGAGAAGAAAACACACCCCAGCCCAAGCTAGTGAGAAGTATACCTGCACCTTGTAAAAGGATCAGTAAAAATGATATTGTTGAGTTCTTGAAAGGGCTTATTTCTGAGCAGACTGGAATCTCAATCAACAACATCTCAGTCACTGACAACCTGACATCCTATGGAATTGACTCAATTGGTGTGGTTAAAGCAACTCAGAAACTCTCAGATTTCCTTGAAACACCAGTTGCAGCTATAGATGTTTTCACTGCATCCTGCATTCTAGAATTGGCTAATTTCTCTGAGGATCTTCTATCAAAGTCTCAGCCTCAGATTTCGAGCAATCCATCCAATGTTCCAGAAGCTGATATTGATTCTAGTGAATTGGTTGTGGAGGTATCTGAGTCTTGCCAATTGGTTCAAAGCCATGAGGTAAAGAGTGGAACTTTAAGTTTCCATCCTATTAGGATTGGCAAGTGTTCTTCTATTGGACCTTATGCTGTTATTCAAAAAGGAAGTGTTATTGGAGAAGGTGTGGAGGTACAGGCATTGCAAAAAGTTGAAGGAGGCCAGCATGTGCTCAAACCTGCTAAGCTTCATAATGTTGATAAGAATGCAGAGCTGCCTGTTATTACCAGCAAAACTCAATATGATATCATCTACCACTTCATGGGGATATATCTAGTTAACTTTCTCAGCTCCCTTGCAGCAGCCATTGCCTACTTCCTGTATATCAGCGCCTACTTGCTTCATGGTTTCATACTCATCGTTCTCACCGGTGCTTTTACTCGTCTCCTCTTATCTAATCAAAAGCAAACCAAATTAAAAAGCTGGCTTAGACATCAAATGACCATTTCCTGCCACCTTAGATGTGCAAAGCTTCTCTTAGGAACAAAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGTATTGTTCCATTAGAGCCATCAACTCAGTTTCAAATCCAGAGTTAGTGTCAATTGGCGCTGGTGTCCATCTTGGAGATTTTAGTAGGATAATTACAGGTGCTTTAGCTGCATTGGCATGTGTTATAGCCAAATGGGTTCTTGTAGAAAGGAAAAAAGCAGGTGAGAAAGTACCTATACGGAGTAAAAGGATCATCATGGATAGCACATGGCAGGCCATTAGAACTTTAGTAGGAGATTATTTTATGGACATGACAAGTGGGTCATTTTTGTTTGTGTTGTGGATGAAGTTGATGGGTGCAGATGTAGATATGGATCATGCAGTTTACGTAGATAGCATGGGAGCATTGTTAAACCCTGAGATGGTGAAGATTGAGAGAGGGGGTTGTGTAGGAAGAGAAGCATTGTTGTTTGGACATATATATGAAGGGGAAGAAGGGATGGTGAAGTTTGGAGAGATCAAAATAAGAGAATATGGGTTTGTAGGGAGTAGAGTTATGGCCATGCCAGGTGTTCAGTTGGAGAATGAGGGTAATCTTAGTGCTTCGTCACTTGCCATGAAAGAAGAAATCATTAGATCAAGATAA 4293 0.4032 MDPEVSTEDQFSELHPSLPENTRIGIVGAGPSGLSAAYALARLGYKNVTVLEKHHMVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSALEELDSHKLAVIDPSSGEYQDIQVADDYVSITSLTLEIQEKVKNNGRIGVHAVSDVAADLTPGYLKLHGIKSIPKSVAYGYTASGYGFIQDMPYAYLHEFTRTSMAGKIRRFKECKEEVMDASALEKELFSKVETNDYYTTVLKIRWLEHLPVGFYYFSEYLEDPSTIGNPVAMQKFYADTNIFLFWSYGNSIDIKGPTVMELAIQATKAMGGEVENVILQRCFKYFPHVGSQDMKEGFYEQLESKLQGSRNTYYVGGLMAFELTERNSSYAMALICKNFANKACFMQNLFPLQTECQKKNPKELGELQQVQFPDLPTLNSYLKYWGTHPITQNRTLYTWINEKGIPVCQRTYREQHFNSFCIAHKLLTSQKPFIKPGDRVLLVYVPGLDFVDAIFGCLRAKVLPVPILPPDPMQRSGQALMKIENIAKSCGITVILSTVAYHFVVRAGSTGDAKGVMISHGGLIHNVKLMRRRYKSTSRTMPVSWLPQYHDMGLIGGLFTSLVSGGSAVLFSPMTFIKNRLLWLETISKYQATHSAGPNFAFELVIRRLESTKDKLQNLDLSSLVFLMVAAEPVRQKTLKRFIELTSPYGLSQKVMAPGYGLAENCVFVSCAFGEGKPIIVDWQGRVCCGYVHPEDVDVDIRIVDPETCEELQEDGKEGEIWISSPSAGIGYWGREELFITGRIKDLIIVAGRNIYSADVEKTVETSSEFLRPGCCAVIGVPEEILSAKGISIPDGSDQVGLVVIAEVRDGKTVSKEVIENIKTSVAEEHGVSVASVKLVKARTISKTTSGKIKRFECIKQFKDDTLNLVLLSPKPILTKKSLVRSFTAGTCREENTPQPKLVRSIPAPCKRISKNDIVEFLKGLISEQTGISINNISVTDNLTSYGIDSIGVVKATQKLSDFLETPVAAIDVFTASCILELANFSEDLLSKSQPQISSNPSNVPEADIDSSELVVEVSESCQLVQSHEVKSGTLSFHPIRIGKCSSIGPYAVIQKGSVIGEGVEVQALQKVEGGQHVLKPAKLHNVDKNAELPVITSKTQYDIIYHFMGIYLVNFLSSLAAAIAYFLYISAYLLHGFILIVLTGAFTRLLLSNQKQTKLKSWLRHQMTISCHLRCAKLLLGTKAFCIYLRLLGAKIGKYCSIRAINSVSNPELVSIGAGVHLGDFSRIITGALAALACVIAKWVLVERKKAGEKVPIRSKRIIMDSTWQAIRTLVGDYFMDMTSGSFLFVLWMKLMGADVDMDHAVYVDSMGALLNPEMVKIERGGCVGREALLFGHIYEGEEGMVKFGEIKIREYGFVGSRVMAMPGVQLENEGNLSASSLAMKEEIIRSR* 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00694 1430 SUPERFAMILY FAD/NAD(P)-binding domain 20 121 IPR036188 -
Rops3g00694 1430 CDD FAAL 430 901 IPR040097 GO:0008610
Rops3g00694 1430 ProSiteProfiles Carrier protein (CP) domain profile. 953 1027 IPR009081 -
Rops3g00694 1430 Gene3D - 945 1025 IPR036736 -
Rops3g00694 1430 Pfam AMP-binding enzyme 545 775 IPR000873 -
Rops3g00694 1430 SUPERFAMILY Acetyl-CoA synthetase-like 414 902 - -
Rops3g00694 1430 Gene3D - 17 148 IPR036188 -
Rops3g00694 1430 Gene3D - 307 377 IPR036188 -
Rops3g00694 1430 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 545 775 - -
Rops3g00694 1430 ProSitePatterns Phosphopantetheine attachment site. 982 997 IPR006162 -
Rops3g00694 1430 Gene3D - 782 908 IPR045851 -
Rops3g00694 1430 PRINTS Adrenodoxin reductase family signature 23 45 - -
Rops3g00694 1430 PRINTS Adrenodoxin reductase family signature 47 60 - -
Rops3g00694 1430 SUPERFAMILY Trimeric LpxA-like enzymes 1200 1423 IPR011004 -
Rops3g00694 1430 Pfam Phosphopantetheine attachment site 958 1022 IPR009081 -
Rops3g00694 1430 Gene3D - 544 781 IPR042099 -
Rops3g00694 1430 Gene3D - 400 543 IPR042099 -
Rops3g00694 1430 Pfam NAD(P)-binding Rossmann-like domain 26 92 - -
Rops3g00694 1430 SUPERFAMILY ACP-like 951 1034 IPR036736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00694 Rops-Chr3 8450056 8450730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00694 544 897 Monolignol Biosynthesis Gene Families AT1G20480 24.737 6.54e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00694 - - twl:119990525 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00439 7 5493815 5494321 Rops3g00694 3 8450056 8450730 PCT