Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00668 ATGCTTCTGTTTGCAGCACGAAACAGAGGATTAAAAATAATTAGGAGAATCACGGACGGTTTTCTACGACAAACGAATTTTAAATCTTTTGTTGCTGCAGTGGAGTTTGGGATTGATGGCTCTATTAATGGCCAGACAGTAGGAAATGCTGCTATGGGCGAGGTTGGTAGCATAGCTGATGAAAACGACGCAGGAGAAAGTTCTGCTGAACCAACTTACAAACAAGATCAAGATGATAATGTGGCTCAAGATTCTTCTGGAGGGGTAACAATACCGTCAGGAGTTCCCGTAGTATCAGTTGTTTCTGTTGATGAACCCTATGTGGGTCAGGAGTTTGAGTCAGAAGCAGCAGCACATGCATTTTACAATGCATATGCCACACATGTTGGATTCATCATACGTGTAAGTAAACTCTCACGATCAAGGCGTGATGGATCTGCTATTGGACGGGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGGCTGACAAACGTGAAAAGATTGTGAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTTAGTTCTGGTAAATGGGTTGTTACAAAGTTTGTAAAGGAGCACACACATCCTCTGATTCCTGGAAAAGGTAGAAGGGATTGCATTTATGAACAATATCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAGTTGGCAATAGAGAAAAAGCGATCTGCGACTTATAAGAGACATCTTGAATTGTTATTTGATTACATCGAGGAGCAGAATGAGACCCTTTCAAAGAAAATACAGCACATAGTAGACGGTGTGAAGGAGATGGAAACCAAAGAACAAAATAGTCATTGA 855 0.4152 MLLFAARNRGLKIIRRITDGFLRQTNFKSFVAAVEFGIDGSINGQTVGNAAMGEVGSIADENDAGESSAEPTYKQDQDDNVAQDSSGGVTIPSGVPVVSVVSVDEPYVGQEFESEAAAHAFYNAYATHVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMADKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLIPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELLFDYIEEQNETLSKKIQHIVDGVKEMETKEQNSH* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00668 284 MobiDBLite consensus disorder prediction 61 90 - -
Rops3g00668 284 Pfam FAR1 DNA-binding domain 121 207 IPR004330 -
Rops3g00668 284 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 44 281 - -
Rops3g00668 284 MobiDBLite consensus disorder prediction 68 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00668 Rops-Chr3 8138001 8141423 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops3g00668 FAR1 6.5e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00668 - - gmx:100806900 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00417 7 5219106 5224448 Rops3g00668 3 8138001 8141423 PCT