Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00650 ATGCACCACAACAACCAACCCCAAAGTAGTCTCACATCATCAAACTCCGAAGAGCCTTGTGAGGATGGTAAGTGGGTCTCGAAGCTTCTTAGGGAGTGTGCTAGAGCAATCTCCAATAGAGACTCTGACAAAATTCACCATCTTCTGTGGATGTTAAACGAGCTTGCTTCACCCTATGGAGATTGTGAACAAAAATTAGCCTCCTACTTCTTGCAAGCTCTATTCTGTAAGGCCACAGAATCTGGCCAAAGGTGCTACAAGACACTAACTTCCGTGGCTGAGAAAAGCCACTCCTTTGATTCAGCCAGAAAGTTAATGCTCAAGTTTCAAGAGGTAAGTCCTTGGACAACTTTTGGACATGTAGCTTCAAATGGTGCCATTTTGGAAGCCTTAGAAGGTGAGACTGCACTCCACATAATTGATCTAAGCAACACACTTTGCACTCAGTGGCCTACTCTATTGGAAGCCTTGGCTACAAGAAACGATGAAACTCCTCACTTGAAGCTCACGGTTGTAGCATTAAAGGGGAGTATAGTAGGATCCGTGATGAAGCAAGTTGGCCAGAGAATGGAGAAGTTTGCAAGGCTAATGGGGGTGCCCTTTGAGTTTAATGCCATAAATGGGGTAGACCATTTAGGAGAGCTCACAAAAGAGGTGTTTGGAGTCCAAGAAGGTGAGGCTATTGCTGTGAATTGTATTGGGGCATTGAGAAAAGTGGAAGAGGAAGAGAGGGAAACCGTGATTCAGATGTTCAAATCACTTAGTCCTAAGGTGGTAACGATTGTTGAGGAGGAAGCTGATTTTTGTAGCTCAAGAAATGACTTTGTGAAGAGCTTTGAAGAGTGTCTGAGGTTTTACACCCTCTACTTTGAGATGCTAGATGAAAGTTTCCCTCCAATAAGTAATGAGAAATTGATGCTAGAGAGGGAGTGCTCAAGAAGCATACTTGGGGTTTTGGGTTGCAATAGTGATGAATTAGGAGATTATTGTGATAGAAGAGAGAGGGGAAGCCAATGGACTAGGAGGCTTAAGGAGGCTTTTTCCCCAGTTTGGTTCAGTGATGATGTTGTGGATGATGTCAAAGCATTGCTCAAAAGGTACAGGCCAGGGTGGTCATTTGTGGTGCCACAAGGAGATGATCAACTCTCAGGAATTTACTTGACATGGAAGGAGGAACCAGTAGTTTGGGCATCAGCATGGAAACCCTAG 1209 0.4425 MHHNNQPQSSLTSSNSEEPCEDGKWVSKLLRECARAISNRDSDKIHHLLWMLNELASPYGDCEQKLASYFLQALFCKATESGQRCYKTLTSVAEKSHSFDSARKLMLKFQEVSPWTTFGHVASNGAILEALEGETALHIIDLSNTLCTQWPTLLEALATRNDETPHLKLTVVALKGSIVGSVMKQVGQRMEKFARLMGVPFEFNAINGVDHLGELTKEVFGVQEGEAIAVNCIGALRKVEEEERETVIQMFKSLSPKVVTIVEEEADFCSSRNDFVKSFEECLRFYTLYFEMLDESFPPISNEKLMLERECSRSILGVLGCNSDELGDYCDRRERGSQWTRRLKEAFSPVWFSDDVVDDVKALLKRYRPGWSFVVPQGDDQLSGIYLTWKEEPVVWASAWKP* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00650 402 ProSiteProfiles GRAS family profile. 17 401 IPR005202 -
Rops3g00650 402 MobiDBLite consensus disorder prediction 1 20 - -
Rops3g00650 402 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 26 391 IPR005202 -
Rops3g00650 402 Pfam GRAS domain family 28 401 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00650 Rops-Chr3 7998951 8000506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00650 2 402 GRAS Transcription Factor Family AT4G37650 50.358 8.47e-143 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops3g00650 GRAS 5.9e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00650 - - aew:130779591 641.728