Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00611 ATGGCTTCTTCTTCAGACAAGCTCCCCCTAAAACCAATCCCTGGAAGCTATGGCCTTCCTTTCTTCGGACCCTTAAGCGACAGACACGACTACTTCTACAACGAAGGAAGGGACAAGTACTTCGCAACCAGAGTCCAAAAGTACAACTCCACAGTTATCAGAACCAACATGCCACCTGGTCCTTTCATCGCCCCAGACCCTAGGGTTATAGCCCTTCTCGATGGTGTTTCCTTCCCCATCCTCTTTGACAACTCCAAGGTTGAAAAACGTGACGTCCTTGACGGCACTTTCATGCCCTCCACCGCCTTCACCGGTGGTTACCGCACCTGTGCTTTCCAAGACACCACTGAACCCTCCCACACCCTTCTCAAACGCTTCTTCCTCCATATCCTCTCTTCCAAACACGACACCTTCATCCCTCTCTTCCGCAACACCATCTCCGATCACTTCACCGACATGGAAGATCAGCTCGCCGGAAAATCAGGCAAGGCAAGCTTCAACAAGTCCATCGGAACCGCCACCTTCAACTTCATCTTCCGTCTCCTAACTGGCAAGGACCCCTCAGAGACCAAGATCGGTTCCAAAGGTCCCGACCTCGTGCAAGCATGGCTCGCGGCTCAGCTTGCTCCTCTAGCCACCGCTGGTTTTCCCAAGATATTCAACTACTTAGAAGATTTCTTGCTCAGAACGATTCCGTTCCCGGCGTGGACAGTGAAGTCAAGCTACAACAAGCTCTACGAAGGTTTAACGGAGGCGGGTACCACGGTGCTGGATGAAGCTGAGAAGATGGGGATCAAGAGAGACGAGGCTGGTCACAACCTTGTGTTCATGTTAGGGTTCAACGCTTTCGGTGGTTTGACGAACCAGTTTCCGATCCTGATCAAGTGGGTAGGTTTGGGTGGCGAGGGTTTGCATAGGCAGGTTGCAGATGAAATCAGGACCGTTGTTAAGGAAGAAGGTGGGGTCACTTTGGGTGCGTTGGATAAGATGACTTTGACCAAATCAGTGGTGTACGAAGCGCTCAGGATAGAGCCTGCTGTGCCGTACCAGTATGCCAAAGCGAGGGAGGATCTGGTGGTGCAGAGTCACGATGCAGCTTATGAGATCAAGAAGGGTGAGATGATCTTTGGATATCAACCGTTGGCTACGAAGGATCCTAAGATATTTGAGAATGCTGAGGAATTTGTGGCCAACAGGTTCGTGGGTGATGGAGAAAAGTTGTTGAAACACGTGTTCTGGTCCAACGGACGTGAGACAGACCAACCTACGCCTGATAATAAACAATGTCCCGCTAAGGATCTGGTGGTGCTGCTGTGCAGGTTGTATTTGGTGGACTTCTTCTTACGCTATGATACTTTTACCTTCGAGTTTAAACCAGTTGTTCTGGGTCCCAACGTTACCATCAAGTCACTCACCAAGGCCTCTACCTACTGA 1434 0.5056 MASSSDKLPLKPIPGSYGLPFFGPLSDRHDYFYNEGRDKYFATRVQKYNSTVIRTNMPPGPFIAPDPRVIALLDGVSFPILFDNSKVEKRDVLDGTFMPSTAFTGGYRTCAFQDTTEPSHTLLKRFFLHILSSKHDTFIPLFRNTISDHFTDMEDQLAGKSGKASFNKSIGTATFNFIFRLLTGKDPSETKIGSKGPDLVQAWLAAQLAPLATAGFPKIFNYLEDFLLRTIPFPAWTVKSSYNKLYEGLTEAGTTVLDEAEKMGIKRDEAGHNLVFMLGFNAFGGLTNQFPILIKWVGLGGEGLHRQVADEIRTVVKEEGGVTLGALDKMTLTKSVVYEALRIEPAVPYQYAKAREDLVVQSHDAAYEIKKGEMIFGYQPLATKDPKIFENAEEFVANRFVGDGEKLLKHVFWSNGRETDQPTPDNKQCPAKDLVVLLCRLYLVDFFLRYDTFTFEFKPVVLGPNVTIKSLTKASTY* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00611 477 Pfam Cytochrome P450 306 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00611 477 PANTHER CYTOCHROME P450 26 8 451 - -
Rops3g00611 477 SUPERFAMILY Cytochrome P450 8 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00611 477 CDD CYP74 43 469 - -
Rops3g00611 477 Gene3D Cytochrome P450 4 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00611 477 PRINTS E-class P450 group IV signature 330 346 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00611 477 PRINTS E-class P450 group IV signature 367 381 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00611 477 PRINTS E-class P450 group IV signature 383 401 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00611 477 FunFam Allene oxide synthase, chloroplastic 8 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00611 Rops-Chr3 7632336 7634047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00611 3 475 Cytochrome P450 AT5G42650 50.105 8.54e-168 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00611 K01723 - gmx:100810890 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00611 3 7632336 7634047 Rops3g00611 3 7632336 7634047 ECH