Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00584 ATGAGTGAGGGCAAGGTAGTAGAAGCAGAAGCAAAGAAAACTCTTGAGGATTTTGATCCTCAAAAGAAGCCAAAGCGAAACAAGTTCGCTTTTGCTTGTGCTATGTTGGCCTCCATGACTTCCATTTTGCTTGGCTATGATATTGGAGTGATGAGTGGAGCAGCCATCTACATAAAAAGAGACCTCAAAGTTTCCGACGTCCAAATCGAGATTCTGTTGGGAATCATCAACATCTACTCTCTCATAGGTTCATGCCTCGCCGGCAGAACCTCGGACTGGATCGGTCGCCGTTACACCATCGTTTTCGCCGGTGCCATATTCTTCGCCGGAGCCCTACTCATGGGATTCTCTCCAAACTATTCCTTTCTCATGTTCGGCCGTTTCGTCGCCGGCATTGGCATCGGTTATGCCCTCATGATTGCCCCCGTCTACACAGCTGAAGTCTCCCCCGCTTCCTCTCGTGGCTTCCTCACCTCCTTCCCCGAGGTTTTTATAAATGGAGGAATATTACTTGGATACATATCGAACTATGCATTTTCAAAGATGAAACTTCAATTGGGTTGGCGAATGATGCTTGGAATAGGTGCAATCCCTTCTGTAATTTTAGCAGCGGGAGTGTTGGCCATGCCTGAGTCACCTCGATGGCTTGTAATGAGGGGTCGTTTGGGAGAGGCAACAAAAGTACTTAACAAAACCTCAGACTCAAAAGAAGAGGCACAATTAAGGTTAGCCGACATCAAACGAGCCGCGGGAATCCCCGAAGATTGCAACGACGACGTCGTTCAGGTAGCCAAGAAAAGCACAGGTGAAGGTGTATGGAAAGAACTCCTCCTTTATCCAACACCCGCAGTTCGTCACATCTTAATAGCTGCCCTTGGCATTCACTTCTTTCAACAAGCATCAGGCGTAGACGCTGTCGTTTTGTACAGCCCCACTATCTTCGAAAAGGCTGGGATCAAGGATGACACGCATAAGCTTCTGGCAACCGTGGCCGTCGGATTTGTTAAGACAATTTTCATCTTGTTGGCTACGTTTACGTTGGACCGTGTTGGACGTCGTCCGTTGTTACTGACAAGTGTTGGTGGCATGGTTCTCTCGCTTCTCACACTCGGTACTAGCCTCACGATTATCGATCACTCCGAAACGAAGGTCATGTGGGCCATAGGATTGAGCATAGCAACGGTGTTATCCTATGTAGCAACGTTTTCCATTGGTGCGGGACCCATCACGTGGGTCTATAGTTCTGAAATATTTCCGTTAAGGCTGCGAGCACAAGGTGCGGCTATGGGAGTAATGGTGAATAGGGTAACAAGTGGTGTGGTCTCAATGACATTTTTGTCCCTATCCAAAGGGATCACCATTGGTGGAGCATTCTTCCTTTTCGCAGGGATTGCAGCTGCTGGGTGGATATTCTTTTACATTATGCTTCCTGAGACACGGGGGAAAACGCTTGAGGATACGGAAGGGTCTTTTGGTAAATTCTGGCGTAAATCTGATACCACTAAGGGAGTTGTCAATGGTAACAGCTATGTCGGCCAGGGCCAGGTCCAGTTAGGGACTAATGTCCAAACTTAA 1575 0.4787 MSEGKVVEAEAKKTLEDFDPQKKPKRNKFAFACAMLASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILLGIINIYSLIGSCLAGRTSDWIGRRYTIVFAGAIFFAGALLMGFSPNYSFLMFGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKMKLQLGWRMMLGIGAIPSVILAAGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLADIKRAAGIPEDCNDDVVQVAKKSTGEGVWKELLLYPTPAVRHILIAALGIHFFQQASGVDAVVLYSPTIFEKAGIKDDTHKLLATVAVGFVKTIFILLATFTLDRVGRRPLLLTSVGGMVLSLLTLGTSLTIIDHSETKVMWAIGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGAAMGVMVNRVTSGVVSMTFLSLSKGITIGGAFFLFAGIAAAGWIFFYIMLPETRGKTLEDTEGSFGKFWRKSDTTKGVVNGNSYVGQGQVQLGTNVQT* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00584 524 ProSiteProfiles Major facilitator superfamily (MFS) profile. 33 480 IPR020846 GO:0022857
Rops3g00584 524 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 27 496 IPR045262 GO:0015144
Rops3g00584 524 FunFam probable polyol transporter 4 23 494 - -
Rops3g00584 524 CDD MFS_PLT 36 486 IPR044776 GO:0005351
Rops3g00584 524 ProSitePatterns Sugar transport proteins signature 1. 87 104 IPR005829 GO:0016020|GO:0022857|GO:0055085
Rops3g00584 524 Gene3D MFS general substrate transporter like domains 23 493 IPR036259 -
Rops3g00584 524 NCBIfam sugar porter family MFS transporter 20 486 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops3g00584 524 Pfam Sugar (and other) transporter 34 488 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops3g00584 524 PRINTS Sugar transporter signature 415 427 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops3g00584 524 PRINTS Sugar transporter signature 124 143 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops3g00584 524 PRINTS Sugar transporter signature 41 51 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops3g00584 524 PRINTS Sugar transporter signature 298 308 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops3g00584 524 PRINTS Sugar transporter signature 392 413 IPR003663 GO:0016020|GO:0022857|GO:0055085
Rops3g00584 524 SUPERFAMILY MFS general substrate transporter 19 487 IPR036259 -
Rops3g00584 524 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016020|GO:0022857|GO:0055085
Rops3g00584 524 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00584 Rops-Chr3 7259187 7261715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00584 12 523 Organic Solute Cotransporters AT3G18830 73.346 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00584 - - gmx:100800461 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00584 3 7259187 7261715 Rops7g00386 7 4976189 4980454 PCT