Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00534 ATGGCTCCAAAGAAGGACAAGGCTCCTCCACCTTCCTCCAAGCCCGCCAAATCTGGAGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAATAACATGGTGCTGTTTGATCAGGGTAGCTATGACAAGCTCCTCACTGAAGCACCCAAATACAAGCTCATCACTCCTTCCATCCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAAGGCTATAAGAGAATTGATGGCTAGAGGTTCAATCAGGTTGGTGTCTTCCCACTCAAGTCAGCAGATTTACACTAGGGCTACAAACACCTAG 327 0.4771 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLTEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRLVSSHSSQQIYTRATNT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00534 108 FunFam 40S ribosomal protein S25 21 108 - -
Rops3g00534 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Rops3g00534 108 MobiDBLite consensus disorder prediction 1 36 - -
Rops3g00534 108 Gene3D - 21 108 - -
Rops3g00534 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00534 Rops-Chr3 6770501 6772955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00534 1 108 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 87.963 1.46e-54 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00534 K02975 - gmx:100789867 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00534 3 6770501 6772955 Rops3g00534 3 6770501 6772955 ECH