Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00525 ATGAAGGATGCAGATGTGTCAAAGCAGATCCAGCAGATGATTAGGTTCATCCGCCAAGAGGCTGAAGAGAAAGCTAATGAAATATCTGTTGCTGCTGAGGAGGAATTCAATATTGAGAAACTACAATTACTTGAAGCTGAAAAGAGAAAGATCAGACAAGAGTACGAGCGAAGAGCCAAACAAATTGATGTTCGTAGAAAGATTGAATACTCAATGCAGCTGAATGCAGCACGTATAAAAGTACTCCAGGCACAAGAGGAGGCGGTGAATTCTATGAAGGATGCTGCTAAAAAGGCACTTTTACGTATCTCAAATGACAAGAAAGCATACAAGAAACTCGTCAAAGACTCGATTGTTCAGGGTTTACTTCGCCTGGGGGAACCATCTGTGCTACTAAGATGCAGAGAGGGTGACCGTAAGTTAGTTGAGTCATTGCTAGAGGAAGCCAAAAAAGAATACTCCGAGAAAGCCAATGTTCAAACCCCAAAGGTTACCATTGATGATCGTGTTTACCTCCCACCAGCTCCTAAAAGCATTGCCCATGATTCTCATGAATCTTTTTGCTCTGGAGGAGTGGTGTTAGCCTCAGAGGATGGGAGAATAGTGTTGGAGAATACCCTGGATGCACGGCTTGAGGTCATTTACAAGCAGAAACTGCCTGAGATAAGGAGGCACCTGGTGGGTGAAAAACAGACTGCAATTGAATTCTAA 711 0.4332 MKDADVSKQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYERRAKQIDVRRKIEYSMQLNAARIKVLQAQEEAVNSMKDAAKKALLRISNDKKAYKKLVKDSIVQGLLRLGEPSVLLRCREGDRKLVESLLEEAKKEYSEKANVQTPKVTIDDRVYLPPAPKSIAHDSHESFCSGGVVLASEDGRIVLENTLDARLEVIYKQKLPEIRRHLVGEKQTAIEF* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00525 236 Hamap V-type proton ATPase subunit E [atpE]. 8 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Rops3g00525 236 Gene3D - 1 62 - -
Rops3g00525 236 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 230 IPR002842 GO:0033178|GO:0046961|GO:1902600
Rops3g00525 236 Coils Coil 38 61 - -
Rops3g00525 236 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Rops3g00525 236 Coils Coil 7 34 - -
Rops3g00525 236 Coils Coil 82 102 - -
Rops3g00525 236 Pfam ATP synthase (E/31 kDa) subunit 16 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Rops3g00525 236 Gene3D - 91 233 IPR038495 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00525 Rops-Chr3 6635009 6637413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00525 1 233 Primary Pumps ATPases(2) AT3G08560 66.953 1.86e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00525 K02150 - gmx:100779392 382.489