Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00522 ATGGGGAGGAATGAGGTGCTAGTGATGAGGTACTCTATCTTATTCTGCTTCATGCCTTTGTTATCTAAACAGAATAATATTACTATTGCTCAGAATCAATATATCCAAAATGATGAGACCCTGGTTTCCCCAGGGGGAACCTTTGAAGCTGGATTCTTCAGCTTTGGAAATTCACAACGCAAATACTTTGGTATATGGTACGAGAACATATCACCAAGGACTATTGTGTGGGTAGCCAACAGAGATGCCCCAGTTGAAAACTCAACAGCAACGTTGAAGCTTACTGATCAAGGGAACCTCCTAATTCTTGATGGCTCAAAGGGTATAGTCTGGTCCTCCAACACATCAAGAACTGCAGCAGAGAAACCTTTCATGCAGCTTCTAGACTCAGGAAACCTTGTTGTGAAAGATGGAGACAACCTTATATGGGAAAGCTTTGATTATCTAGGTGACACTTTCCTTGCAGGAATGAAGATCAAGAGCAATTTATTAAGTGGTCCATATAGGTTTCTGACATCTTGGAGAAACACTGAAGACCCTGCTGTCGGTGAGTTTTCATATCGTATAGACACTCGCGGCTTTCCACAACTAGTAGTCACAAAGGGAGCAACTGTAACGTTCAGAGCAGGCCCGTGGACTGGCCATATGTTTGCAGTAGCTTCTTGGCTAAGAATACAGAAAACGTTGAAATTCTCTTTTCAGTTCACTGGCCAGGAAATCTCTTACGAATATGAAACCTTGAACCGTTCAATTATTACCAGAATAGTGCTCAACCCGTCAGGCACTGCACAACGTTGGATATGGTCAGATCAGACTCAAAGTTGGGAGATCATATCTAATTATCCCGTGGATCAGTGTGAATATTATGCATTTTGTGGTGCTAATTCCAAGTGTAACGCTGCAAACAATCCCATATGTGAATGCTTGGAAGGTTTCACACCAAAATTTCAAGAAAAATGGAACTCATTTGATTGGACTGGTGGGTGTGTTCCAATAAAAAATTATAGCTGTCAAAATGGAGATGGCTTTCTGAAGTACACAGGAGTGACGTTGCCAGACACATCTTCTTCCTGGTTTGTCATGAACAAGAGTCTTGATGAATGTGAAACGTTATGTGTGCATAACTGCTCTTGCACGGCATATGCATATATAGATGATGGTGTTGGTTGGAGTGTCTGCTTGAATTGGTTTGCTGACATTGTGGACTTGAGAAAACACCCTGACCAAGGACAGGAAATCTACATACGAGGGGTTGCTTCTAAGCTAGATCATAGAAGGAATAAGAGGAACTTTAATACCAAGAAGCTTGCAGGGATTGTGGTAGGAATCATTATATTCATCATATGCATAACAATCCTTGGATTGGTCACATTCACTTGTATACAGAGGAAGAAGAATGAGAGGCCAGGTGACTCCGTGACAAGAACTATAAATCACTGGAAGGACAAGAGAGGGGACGAAGACATTGATTGGGCAACAATATTTGATTTTTCAACCATCTCTAATACTACCAATCACTTTTCGGAAAGTAACAAATTAGGAGAAGGTGGCTTTGGACCAGTATACAAGGGCTTGTTAGCAGATGGGCAGGAGATTGCTGTGAAGAGGCTTTCTAATACTTCGGGACAGGGAGTAGAAGAGTTCAAAAATGAAGCCATGTTAATAGCAAGACTTCAGCATCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCATCAAGATGAAAAGTTGTTGATCTATGAATTCATGCACAACGGAAGCTTGGATTACTTCATTTTTGATTCAACACGAAGAAAACTACTAGATTGGAATATGCGGTTCCAAATTATTGATGGGATTGCTCGAGGGCTTCTTTATCTTCACCGTGACTCAAGATTAAGAATTATTCACAGAGATCTCAAAACCAGTAACATTCTTCTTGATGATGAAATGAACCCAAAGATATCAGATTTTGGTTTGGCGAGAACATTTATAGGAGATCAAATTGAGGCTCAAACTAAGAGAGTTATGGGAACATATGGTTATATGTCTCCTGAGTATGCGGTTCATGGATTTTTTTCAATCAAATCCGATGTCTTTAGCTTTGGTGTAATTGTACTTGAGATAATTAGTGGGAAGAAGATGCGGAGATTTCGTGACCCTCACCATCATCTTAATCTTCTTGGCCATGCATGGAGACTCTGGATTGAAGAAAGAGCATTAGAGCTAATAGATGAAATAGATTCAGTAATCCCATCCGAAATATTGAGATATATTCATGTGGGTCTATTATGCGTACAACAGAGACCAGAAAATAGGCCTAACATGTCTTCTGTAGTTTTAATGTTGAATGGCGAAAAGGAACTCCCTAAGCCAAGTCTGCCCGCGTTTTACACTGGAATTGATGATCCAAGTTGGTCAGTATCTTCTTCAAGAAATGGTAAAAGGTATTCAGCAAATGAAGTTACCGTCTCATTATTCGAGCCTAGATAA 2472 0.4017 MGRNEVLVMRYSILFCFMPLLSKQNNITIAQNQYIQNDETLVSPGGTFEAGFFSFGNSQRKYFGIWYENISPRTIVWVANRDAPVENSTATLKLTDQGNLLILDGSKGIVWSSNTSRTAAEKPFMQLLDSGNLVVKDGDNLIWESFDYLGDTFLAGMKIKSNLLSGPYRFLTSWRNTEDPAVGEFSYRIDTRGFPQLVVTKGATVTFRAGPWTGHMFAVASWLRIQKTLKFSFQFTGQEISYEYETLNRSIITRIVLNPSGTAQRWIWSDQTQSWEIISNYPVDQCEYYAFCGANSKCNAANNPICECLEGFTPKFQEKWNSFDWTGGCVPIKNYSCQNGDGFLKYTGVTLPDTSSSWFVMNKSLDECETLCVHNCSCTAYAYIDDGVGWSVCLNWFADIVDLRKHPDQGQEIYIRGVASKLDHRRNKRNFNTKKLAGIVVGIIIFIICITILGLVTFTCIQRKKNERPGDSVTRTINHWKDKRGDEDIDWATIFDFSTISNTTNHFSESNKLGEGGFGPVYKGLLADGQEIAVKRLSNTSGQGVEEFKNEAMLIARLQHRNLVKLLGCSIHQDEKLLIYEFMHNGSLDYFIFDSTRRKLLDWNMRFQIIDGIARGLLYLHRDSRLRIIHRDLKTSNILLDDEMNPKISDFGLARTFIGDQIEAQTKRVMGTYGYMSPEYAVHGFFSIKSDVFSFGVIVLEIISGKKMRRFRDPHHHLNLLGHAWRLWIEERALELIDEIDSVIPSEILRYIHVGLLCVQQRPENRPNMSSVVLMLNGEKELPKPSLPAFYTGIDDPSWSVSSSRNGKRYSANEVTVSLFEPR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00522 823 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Rops3g00522 823 Pfam D-mannose binding lectin 74 175 IPR001480 -
Rops3g00522 823 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Rops3g00522 823 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Rops3g00522 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 146 - -
Rops3g00522 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 180 IPR036426 -
Rops3g00522 823 Gene3D Phosphorylase Kinase; domain 1 481 582 - -
Rops3g00522 823 Gene3D - 21 146 IPR036426 -
Rops3g00522 823 SMART ntp_6 338 417 IPR003609 -
Rops3g00522 823 PIRSF SRK 3 823 IPR024171 GO:0004674
Rops3g00522 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 582 - -
Rops3g00522 823 SUPERFAMILY Protein kinase-like (PK-like) 494 801 IPR011009 -
Rops3g00522 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 784 - -
Rops3g00522 823 Pfam Protein tyrosine and serine/threonine kinase 510 774 IPR001245 GO:0004672|GO:0006468
Rops3g00522 823 SMART serkin_6 507 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g00522 823 ProSiteProfiles Protein kinase domain profile. 507 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g00522 823 Gene3D Transferase(Phosphotransferase) domain 1 583 784 - -
Rops3g00522 823 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Rops3g00522 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 763 - -
Rops3g00522 823 CDD STKc_IRAK 513 778 - -
Rops3g00522 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Rops3g00522 823 CDD B_lectin 32 148 IPR001480 -
Rops3g00522 823 CDD PAN_AP_plant 334 416 - -
Rops3g00522 823 Pfam PAN-like domain 337 403 IPR003609 -
Rops3g00522 823 SMART blect_4 32 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00522 Rops-Chr3 6597681 6601293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00522 427 791 Receptor kinase-like Gene Family AT4G23190 51.475 9.43e-120 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g00522 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00522 - - lja:Lj3g3v3375760.2 1223.38