Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g00520 | ATGAGAAGCGCTACGTGTTATATGTTAGTGCTAGTGTTGAGTGTTACCTTTGTTTGGTTCCACGTTGCAGTGTGTTCTTCATTCAGTGATCTAGACGCGCTGCTGAAGCTGAAGGAATCGATGAAGGGAGAGAAAGCGAAAGATGATGCACTGGAAGATTGGAAGTTTTCGACGTCGATTTCTGCACACTGTTCATTTTCTGGGGTAATATGTGACCAAAACCTGAGAGTGGTTGCTCTGAACGTGTCGTTTGTTCCACTGTTCGGGCACATTCCACCGGAGATTGGATTGTTGGACAAACTGGAGAGCCTCACCATCACCATGGCCAACCTCACAGACCAGCTTCCCAACGAGCTCGCTAACCTCACTTCCCTTAAGGTCCTCAACATCTCCCACAACGTCTTCGCCGGCCACTTCCCCGGCAACATCACACTCCACATGCCCAAACTGGAGGTCCTCGACGCCTATGACAACAGCTTCAGTGGACAACTTCCTGAGGAAATCGTCAAACTCCCGAACCTCAAGTACCTCCATCTCGCAGGGAACTATTTCTCCGGCACGATACCGGAGAGTTACTCGGAATTTCAGAGCTTGGAATTTTTGGGCTTGAACATGAACAGCTTAACGGGAAAGATTCCCAAGAGCTTGGCTAACTTAAAGACGCTGAAGGAACTTCATCTCGGTTACCTCAATGTTTATGAAGGTGGAATCCCACCGGAGCTTGGTTCCATGAAATCTCTGCAAAAGCTTGACTTGTCTAGCTGCAACCTCAGTGGCGAGATTCCACCGAGCTTGAGCAATTTGAAAAACCTGAACACCTTGTTCTTGCAAATTAACAACCTCACCGGAACTATTCCGCCGGAGATTTCTGCCATGACGAGCCTCATGTCGTTGGATCTCTCCATCAACGACCTCACCGGAGAGATTCCAGAGAGCTTCTCCAAGCTCAAGAACCTCACTCTCTTGAACTTCTTCCAGAACAAGCTCCGTGGTCCTCTCCCTTCCTTCATCGGCGACCTTCCGTACCTGGAAACGCTTCAGGTTTGGGAGAACAACTTCTCCTTCGTGCTGCCTCAGAATCTAGGCCAAAATGGGAAGCTCATATACTTCGACGTCACCAAGAACCACCTCACCGGATTGATCCCTCCTGATTTATGCAAAAGTAGGAGGTTGAAAACGTTCATCATCACCGATAACTTCTTCCACGGTCCATTCCCTGAAGATATCGGCGAGTGCAAGTCACTTCTCAAGATCCGCGTCGCCAATAACTACCTAGACGGGCCGGTTCCCCCGGGGATTTTCCAACTACCTAATGTCACGATAATTGAACTGGGCAATAACCGTTTCAACGGCCAACTACCTTCCGTGATTTACGGCGATTATCTCGGGATTCTAACGCTCTCCAACAACTTATTCACGGGAAGAATACCCGCAGCGTTGAAAAACTTCAGAGCATTGCAGACTTTGTCTCTGGATGCTAATGAGTTCGTTGGTGAAATCCCTGGGGAAGTTTTTCAGTTACCAATGCTGACGAAGATCAACATAAGCGGCAACAACTTGACAGGTCCAATCCCAACGATGGTTACTCACTGCGTTTCACTGACTGCCGTTGATCTCAGCGGGAACATGCTGGTTGGTGAGGTTCCGAAGGGTATGAAGAATTTGATGGACTTGAGCATTTTGAATCTGTCTCGGAACTTTGTTTCAGGGCCAGTCCCTGACGAGATTCGATTCATGACGAGTCTCACGACGTTGGATCTCTCCTACAACAATTTCACCGGCAGAGTCCCCACCGGTGGTCAGTTCCTGGTGTTCAACGACAGGTCGTTTGCCGGGAACCCCAACCTCTGTTTCCCTCACCAGTCCTCTTGTCCTTCCTCCTTCCTCTACCCGTCAACCAAAAGCCGCACCAAAACGACGAGAGTCAGAGCCATCGTTGTTGGGATTGCACTGGCCACCGCCGTTCTGCTGGTGCTGGTGACTGTTTACGTGACGAGGAAGAGAAAGCTCCACAGATCAAAAGCATGGAAGTTGACGGCGTTCCAGAGATGGGACTTAAAAGCGGACGATGTGGTGGAGTGTCTGAAAGAAGAGAACATAATAGGGAAAGGAGGAGCAGGGATCGTGTACAGAGGGTCCATGCCAAACGGAACGGACATAGCCATAAAGCGTTTGGTTGGACAAGGAAGTGGAAGAAACGATTACGGATTCAAGGCTGAGATAGAAACACTTGGAAGGATAAGGCACCGGAATATAATGAGGCTTCTTGGGTACGTCTCCAACAAGGACACCAACTTGTTGTTATATGAGTACATGCCAAATGGTAGTTTAGGGGAGTGGTTGCATGGCTCTAAAGGTGGACACTTGAGGTGGGAAATGAGGTATAGAATTGCAGTGGAAGCAGCTAAGGGATTGTGCTATTTGCACCATGATTGTTCTCCTCTGATTATTCACAGAGATGTCAAGTCCAATAATATATTGCTCGATGCAGATTTTGAAGCCCATGTAGCTGATTTTGGACTTGCCAAGTTCTTGTACGACCCAGGAGCCTCTCAGTCCATGTCATCCATCGCTGGCTCCTACGGTTACATTGCTCCAGAGTATGCTTACACACTGAAAGTGGATGAGAAAAGTGATGTGTATAGTTTTGGAGTAGTGCTGTTAGAACTGATCGTGGGAAGAAAACCAGTGGGTGAGTTTGGAGATGGGGTTGACATCGTCGGATGGGTCAATAAAACCAAATCAGAGCTATCTCAGCCGTCCGATGCAGCATTAGTGTTGGCAGTGATGGACCCACGGCTTAGTGGGTACCCCTTGACAAGTGTCATCCACATGTTCAACATAGCTATGATGTGTGTTAGGGAAATGGGACCCACCAGGCCCACCATGAGGGAAGTAGTTCATATGCTCACTAATCCTCCTCAGTCTACCACTCACAACCTAATTAATCTCTAG | 2955 | 0.4846 | MRSATCYMLVLVLSVTFVWFHVAVCSSFSDLDALLKLKESMKGEKAKDDALEDWKFSTSISAHCSFSGVICDQNLRVVALNVSFVPLFGHIPPEIGLLDKLESLTITMANLTDQLPNELANLTSLKVLNISHNVFAGHFPGNITLHMPKLEVLDAYDNSFSGQLPEEIVKLPNLKYLHLAGNYFSGTIPESYSEFQSLEFLGLNMNSLTGKIPKSLANLKTLKELHLGYLNVYEGGIPPELGSMKSLQKLDLSSCNLSGEIPPSLSNLKNLNTLFLQINNLTGTIPPEISAMTSLMSLDLSINDLTGEIPESFSKLKNLTLLNFFQNKLRGPLPSFIGDLPYLETLQVWENNFSFVLPQNLGQNGKLIYFDVTKNHLTGLIPPDLCKSRRLKTFIITDNFFHGPFPEDIGECKSLLKIRVANNYLDGPVPPGIFQLPNVTIIELGNNRFNGQLPSVIYGDYLGILTLSNNLFTGRIPAALKNFRALQTLSLDANEFVGEIPGEVFQLPMLTKINISGNNLTGPIPTMVTHCVSLTAVDLSGNMLVGEVPKGMKNLMDLSILNLSRNFVSGPVPDEIRFMTSLTTLDLSYNNFTGRVPTGGQFLVFNDRSFAGNPNLCFPHQSSCPSSFLYPSTKSRTKTTRVRAIVVGIALATAVLLVLVTVYVTRKRKLHRSKAWKLTAFQRWDLKADDVVECLKEENIIGKGGAGIVYRGSMPNGTDIAIKRLVGQGSGRNDYGFKAEIETLGRIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGSKGGHLRWEMRYRIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWVNKTKSELSQPSDAALVLAVMDPRLSGYPLTSVIHMFNIAMMCVREMGPTRPTMREVVHMLTNPPQSTTHNLINL* | 985 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g00520 | 984 | Gene3D | Ribonuclease Inhibitor | 235 | 336 | IPR032675 | - | |
Rops3g00520 | 984 | Gene3D | Ribonuclease Inhibitor | 28 | 188 | IPR032675 | - | |
Rops3g00520 | 984 | SUPERFAMILY | RNI-like | 261 | 599 | - | - | |
Rops3g00520 | 984 | Gene3D | Phosphorylase Kinase; domain 1 | 661 | 771 | - | - | |
Rops3g00520 | 984 | SUPERFAMILY | Protein kinase-like (PK-like) | 691 | 970 | IPR011009 | - | |
Rops3g00520 | 984 | Pfam | Leucine Rich repeat | 580 | 594 | IPR001611 | GO:0005515 | |
Rops3g00520 | 984 | FunFam | Leucine-rich repeat receptor-like protein kinase | 28 | 190 | - | - | |
Rops3g00520 | 984 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase | 772 | 983 | - | - | |
Rops3g00520 | 984 | SMART | serkin_6 | 695 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g00520 | 984 | Gene3D | Transferase(Phosphotransferase) domain 1 | 772 | 981 | - | - | |
Rops3g00520 | 984 | Pfam | Protein tyrosine and serine/threonine kinase | 696 | 969 | IPR001245 | GO:0004672|GO:0006468 | |
Rops3g00520 | 984 | Pfam | Leucine Rich Repeat | 246 | 268 | IPR001611 | GO:0005515 | |
Rops3g00520 | 984 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 816 | 828 | IPR008271 | GO:0004672|GO:0006468 | |
Rops3g00520 | 984 | Pfam | Leucine rich repeat | 485 | 544 | IPR001611 | GO:0005515 | |
Rops3g00520 | 984 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 232 | 336 | - | - | |
Rops3g00520 | 984 | Gene3D | Ribonuclease Inhibitor | 341 | 628 | IPR032675 | - | |
Rops3g00520 | 984 | Gene3D | Ribonuclease Inhibitor | 189 | 234 | IPR032675 | - | |
Rops3g00520 | 984 | SUPERFAMILY | L domain-like | 57 | 281 | - | - | |
Rops3g00520 | 984 | SMART | LRR_typ_2 | 436 | 460 | IPR003591 | - | |
Rops3g00520 | 984 | SMART | LRR_typ_2 | 579 | 602 | IPR003591 | - | |
Rops3g00520 | 984 | SMART | LRR_typ_2 | 171 | 195 | IPR003591 | - | |
Rops3g00520 | 984 | SMART | LRR_typ_2 | 340 | 364 | IPR003591 | - | |
Rops3g00520 | 984 | SMART | LRR_typ_2 | 244 | 268 | IPR003591 | - | |
Rops3g00520 | 984 | SMART | LRR_typ_2 | 292 | 315 | IPR003591 | - | |
Rops3g00520 | 984 | SMART | LRR_typ_2 | 122 | 146 | IPR003591 | - | |
Rops3g00520 | 984 | SMART | LRR_typ_2 | 483 | 507 | IPR003591 | - | |
Rops3g00520 | 984 | Pfam | Leucine rich repeat N-terminal domain | 29 | 72 | IPR013210 | - | |
Rops3g00520 | 984 | ProSiteProfiles | Protein kinase domain profile. | 695 | 982 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g00520 | 984 | FunFam | LRR receptor-like serine/threonine-protein kinase EFR | 337 | 627 | - | - | |
Rops3g00520 | 984 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 234 | 971 | - | - | |
Rops3g00520 | 984 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 | 664 | 771 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g00520 | Rops-Chr3 | 6570706 | 6574000 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g00520 | 25 | 982 | Receptor kinase-like Gene Family | AT1G75820 | 63.333 | 0.0 | 1236 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Rops3g00520 | PK_Tyr_Ser-Thr | 6.3e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g00520 | K00924 | - | gmx:732625 | 1536.93 |