Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00491 ATGGAGTTCCTTCTGCAATTTCTTGAACCTTCAACCATTCTCTTTCTCCTATTCTCTCTGTTAGCTTTTGTTGTCTTCATACTTCGCCTACGTAGAAAACTCCCATACCCACCGGGGCCAAAAGGGCTACCCATCATAGGGAACATGTTGATGATGGACCAACTAACCCACCATGGGCTCGCTCTGCTCGCCAAACGTTTCGGTGGGCTTTGCCACCTCAAAATGGGCTCTCTCCACATGGTGGTGGTGTCAACACCAGATATGGCCCGCGAAGTCCTCCAAGCCCAAGATCGCGTTTTCTCAAACAGGCCCGCGAATGTTGCGATCTCCTATTTGACCTACGACCGGGCCGACATGGCCTTTGCCAATTACGGCCCATTTTGGCGACAGACGCGTAAAATCTGTGTAATGAAACTCTTCAGCCGCAAACGGGCCGAGTCGTGGGCCTCCGTACGAGAAGATGTAGAAGGAACGGTTCGAACCGTGGCAAAAAGAACCGGTTCATCCGTTAACTTAGGTGAGCTGGTTTTTGCTTTAACAAGGAGCATTACCTTTAAGGCCGCGTTTGGGAGCAGCTTAAATAAAGGGCAAGAGGAATTCATGAGAATATTGCAAGAGTTTTCGAAGCTTTTTGGAGCTTTCAACATTGCTGATTTTATTCCATGGCTGGGTTATTGGTTTCATTCACAAGAGTTTAAGAAAAGAATGGTTAGTGCAAGGCAAGCACTTGATGTGTTTATTGATGAGATCATTGATGATCACGTGGCAAAGAAGAAGAACAACATTGATAAGAAGGATGAGAATGAAGCAGATGAAGATATGGTTGATGAGTTGATGGTGTTCCTAAATGAAAGAGATGGTGATAAAACCCGTTTGGACAATTCAACGCTCAAGCTTACTAGAGATAACATCAAAGCTCTTATAATGGATGTCATGTTTGGTGGAACCGAGACAGTAGCATCAGTGATAGAATGGACAATGGCAGAGCTCATGAGGAGCCCAAAGGATCTTCACAAGGTTCAACAAGAACTCCAAGATACTGTGGGTTTAAATAGAAAATTCAACGAATCTGATCTAGACAAATTAACTTATCTCAAATGCATAATCAAAGAAACCTTGCGTCTCCACCCTCCAATTCCCCTACTTCTCCATGAGACTGCACAAGATAGTAATGTTGCAGGTTATTTTATCCCAAAAGCAACACGAGTTTGGATCAATGCATGGGCCATTGGACGTGACAAAAGTGCATGGGATGACCCAGATACATTTAACCCATCAAGGTTCTTGAATGATGGCATGCCAGATTTCAAAGGGAGCAACTTTGAGTTCATTCCTTTTGGGTCAGGGAGAAGGTCATGCCCCGGTATGCAACTTGGACTCTATGCTGTGGAAATGGCTGTGGCTAACTTGCTTCATTGTTTCAAGTGGGAGTTACCTAATGGAATGAAGCCAAGTGAGCTTGATATGAATGATGTGTTTGGTCTCACTGCTCCAAGAGCAGTTCAACTTGTAGTTGTACCCGCTTATCGTCTCAATTGTCCCCTTGATGAGATTTAA 1557 0.4444 MEFLLQFLEPSTILFLLFSLLAFVVFILRLRRKLPYPPGPKGLPIIGNMLMMDQLTHHGLALLAKRFGGLCHLKMGSLHMVVVSTPDMAREVLQAQDRVFSNRPANVAISYLTYDRADMAFANYGPFWRQTRKICVMKLFSRKRAESWASVREDVEGTVRTVAKRTGSSVNLGELVFALTRSITFKAAFGSSLNKGQEEFMRILQEFSKLFGAFNIADFIPWLGYWFHSQEFKKRMVSARQALDVFIDEIIDDHVAKKKNNIDKKDENEADEDMVDELMVFLNERDGDKTRLDNSTLKLTRDNIKALIMDVMFGGTETVASVIEWTMAELMRSPKDLHKVQQELQDTVGLNRKFNESDLDKLTYLKCIIKETLRLHPPIPLLLHETAQDSNVAGYFIPKATRVWINAWAIGRDKSAWDDPDTFNPSRFLNDGMPDFKGSNFEFIPFGSGRRSCPGMQLGLYAVEMAVANLLHCFKWELPNGMKPSELDMNDVFGLTAPRAVQLVVVPAYRLNCPLDEI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00491 518 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 Gene3D Cytochrome P450 29 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 PANTHER CYTOCHROME P450 84A1-RELATED 10 515 - -
Rops3g00491 518 Pfam Cytochrome P450 37 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00491 518 CDD CYP71-like 66 503 - -
Rops3g00491 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Rops3g00491 518 FunFam Cytochrome P450 84A1 29 509 - -
Rops3g00491 518 SUPERFAMILY Cytochrome P450 37 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00491 Rops-Chr3 6292080 6294447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00491 4 515 Monolignol Biosynthesis Gene Families AT4G36220 66.214 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00491 K09755 - zju:107426594 742.265