Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00470 ATGGGTTTCCGCATATCAGCTATTATTAGAAGGTCATCATTTTCTGCATCCCAAGCAGCTTCAAAGGGATTTGAAGTCCCAAAAGGCCACCTTGCAGTTTATGTTGGAGATAAAATGAGGCGCTTCGTGATTCCAATATCATACTTGAACCAACCTTCATTTCAAGAATTACTAAGTCAAGCAGAAGAAGAATTTGGATATGATCATCCAACGGGTGGTCTCACAATTCCATGCAGTGAGGATGAGTTCCTAAACCTCACTTCTCGCTTGAATGAGCTGTAA 282 0.4113 MGFRISAIIRRSSFSASQAASKGFEVPKGHLAVYVGDKMRRFVIPISYLNQPSFQELLSQAEEEFGYDHPTGGLTIPCSEDEFLNLTSRLNEL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00470 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 90 IPR003676 GO:0009733
Rops3g00470 93 Pfam Auxin responsive protein 11 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00470 Rops-Chr3 5989109 5989390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00470 12 83 Calmodulin-binding Proteins AT5G20810 51.389 2.04e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00470 K14488 - gmx:100786095 152.14