Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00469 ATGGGTTTCCGCATATCGGGTATTATTAGAAGGTCATCATTTTCTGCATCCCAAGCAGCTTCCAAGGGATTTGAAGTCCCAAAAGGCCACCTTGCGGTTTATGTTGGAGATAAAATGAGACGGTTCGTGATTCCAATATCATACGTGAACCAACCTTCATTTCAAGAATTACTATGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAACCGGTGGTCTCACAATTCCATGCAATGAGGATGAGTTCCTAAACCTCACTTCTCGCTTGTATGAGCTGTAA 282 0.4149 MGFRISGIIRRSSFSASQAASKGFEVPKGHLAVYVGDKMRRFVIPISYVNQPSFQELLCQAEEEFGYNHPTGGLTIPCNEDEFLNLTSRLYEL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00469 93 Pfam Auxin responsive protein 12 89 IPR003676 GO:0009733
Rops3g00469 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 90 IPR003676 GO:0009733
Rops3g00469 93 Coils Coil 83 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00469 Rops-Chr3 5975560 5975841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00469 12 83 Calmodulin-binding Proteins AT5G20810 48.611 1.52e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00469 K14488 - gmx:100786095 141.354