Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00468 ATGGGCTTTCGCTTAGCTGGTGTTAGAAGGGCATCATCTGCTGTAACAAAAGCAGCTTCCAAGGATGTGGAAGTCCCGAAAGGCTATCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTATGATTCCCATTTCATTCCTGAATCAACCTTCATTTCAAGAGTTACTAAGCCAAGCAGAAGAAGAATTCGGATATGCTCATCCAATGGGTGGTCTTACAATTCCATGCAAGGAAGATGTGTTTGTAGATATAGCTTCTCGCTTGAATGTGCTATAA 279 0.4194 MGFRLAGVRRASSAVTKAASKDVEVPKGYLAVYVGEKMKRFMIPISFLNQPSFQELLSQAEEEFGYAHPMGGLTIPCKEDVFVDIASRLNVL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00468 92 Pfam Auxin responsive protein 11 88 IPR003676 GO:0009733
Rops3g00468 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00468 Rops-Chr3 5973247 5973525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00468 24 82 Calmodulin-binding Proteins AT3G43120 55.932 1.33e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00468 K14488 - gmx:100806671 156.377