Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00467 ATGAAAGAGACATTGCTGAAGGAAGATGATCAAAGAAAAGATCTCAAATTTAAGAAGAATGTATCAAAATACTTGATGATGCCAATGACTTATGTTGTTTGTGAAGGTATTAGAAGGGCATCATTATTAGCTGCAAACCAAGCTTCTTCAAAAGTTATAGATGAGCCTAAGGGCTATCTTGCAGTTTATGTTGGAGAGAAAATAAAGCGATTTGTGATCCCAATATCATACTTGGGGCAAACTTCATTCCAAGACTTGCTAAGCCAAGCAGAGGAACAATTCGGATATGACCATCCAATGGGAGGTCTCACAATTCCTTGTGAAGAAGCTGTTTTCTTAGATATAATTTCTAGCTTGAACAACCCCATGGGTGGAAGGAGCTGA 384 0.3802 MKETLLKEDDQRKDLKFKKNVSKYLMMPMTYVVCEGIRRASLLAANQASSKVIDEPKGYLAVYVGEKIKRFVIPISYLGQTSFQDLLSQAEEQFGYDHPMGGLTIPCEEAVFLDIISSLNNPMGGRS* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00467 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 50 119 IPR003676 GO:0009733
Rops3g00467 127 Pfam Auxin responsive protein 46 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00467 Rops-Chr3 5824871 5826591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00467 47 121 Calmodulin-binding Proteins AT3G43120 46.667 2.23e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00467 K14488 - gmx:112998524 138.658