Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00465 ATGGGTTTCCGCATCCCAAGTGTTATTAGAAGGGCATCATTTTCTACAACCCAAGCATCTTCCAAGGGAATTGAAGTCCCAAAAGGCTATCTTGCTGTCTATGTTGGATATAAAATGAGGCGGTTTCTGATTCCAGTATCATACTTGAACCAACCTTCATTTCAAGAATTATTAAGTCAAGTTGAAGAAGAATTCGGATATAATCATCCAACGGGTGGTCTCACAATTCCATGCAGTGAGGATGAGTTTCTAAGCCTCACTTCTCGCTTGAATTAG 276 0.4022 MGFRIPSVIRRASFSTTQASSKGIEVPKGYLAVYVGYKMRRFLIPVSYLNQPSFQELLSQVEEEFGYNHPTGGLTIPCSEDEFLSLTSRLN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00465 91 Coils Coil 87 91 - -
Rops3g00465 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 90 IPR003676 GO:0009733
Rops3g00465 91 Pfam Auxin responsive protein 11 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00465 Rops-Chr3 5775499 5775774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00465 15 83 Calmodulin-binding Proteins AT3G43120 49.275 7.33e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00465 - K14488 gmx:100786095 161.77