Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00464 ATGTCACGCTGCCAGGACAAACACAACAACGAGGCTGGGCATGATTTGGTCTCAAACTCCACATTACATTCATCGTCTGTATGGTTTGTTTCTTCTAAGTCTTCTGGTCAGAAGATATGCTCCAACATGCAAGTTTCTTTTCAACACATTAATAATAGGAGAAAGAAGAGGCTTTCTTTGATGCGATCGAGTAAATATAGATGTGGAAAAGCTAATGTCAAAAGTTGCTATATGGCTGCAACTTTGGAGCTTTCACAACAAGAAAATGAACAGAAGAAAGAAAGGGCCTTAACGGCGGCGATCTATGAGCTGGAAAGATTTTTCAAGAAGAAGACTTCAAGACATAATGAAGGTGGAGGGGTATCGAAAACATTGTACAAGGAAATTGCTGATTGTGATGCAAACTTGCAGAGAAGGCCAATAAGGTTGGAGTTATCCCCTAAAGAAGAAATAGTTGCTTCAATGCACGTGGACATAATCAGGAAGAATGGATTTACTTTGGAAGAGGATCCAAATGCAGCTCCTGGATGCCGTTATAAATTAAAGTCTGTCCCCTTTAGTAAAAACACCATGTTTGGAGTTGAAGAATCAAATACTTCTTTCTTACACAAGTCTTTTCAAATTAACCTAAAATTTGCAATGGGTTTCCGTTTGCCAATTCTTCAAAGGCGCAGTGATGTTCCAAAGGGCCATCTTGCAGTTTATGTAGGAGAAAATCAAAAGAAGCGGTTTGTGATTCCTATATGGTACTTGAGTCAACCTTCAATTCATGATTTGCTGAGTCAAGTTGAACAAGAATTTGGATTTGATCATCCAATGGGTGGCCTCACAATCCCTTGTAGAGAAGATGTCTTCCTAGATAGCATTTCTCACTTGCATAGGTCATAG 888 0.393 MSRCQDKHNNEAGHDLVSNSTLHSSSVWFVSSKSSGQKICSNMQVSFQHINNRRKKRLSLMRSSKYRCGKANVKSCYMAATLELSQQENEQKKERALTAAIYELERFFKKKTSRHNEGGGVSKTLYKEIADCDANLQRRPIRLELSPKEEIVASMHVDIIRKNGFTLEEDPNAAPGCRYKLKSVPFSKNTMFGVEESNTSFLHKSFQINLKFAMGFRLPILQRRSDVPKGHLAVYVGENQKKRFVIPIWYLSQPSIHDLLSQVEQEFGFDHPMGGLTIPCREDVFLDSISHLHRS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00464 295 Pfam Auxin responsive protein 223 290 IPR003676 GO:0009733
Rops3g00464 295 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 224 292 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00464 Rops-Chr3 5767928 5773966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00464 226 285 Calmodulin-binding Proteins AT3G43120 53.333 2.84e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00464 K10858 - gmx:100802535 199.904