Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00460 ATGGGTATTCGTCTGCTTCCAGAAATGGTTCACTATGCAAAGCAAATTTTACGACTGCGGTGTCATCACTCAAAGCATAATTTTTCAGGCCAAAGTTCAAACATTTTTTATGTCCCAAAAGGCCATTTTGCGGTGTACGTGGGAGATGAGGATGAGTATAAAAAGCGGTTTGTGGTCCCAGTATCCTACTTGAAACAACCTCTGTTTCAGGACTTATTGAGTCGTGCTGAGGAAGAGTTTGGTTTTGACTACCCAATGGACAATCTTGTGTTTCCATGTGCCATTGATGATTTTGTTAATCTTACTTCTCGTTTGAATGGGTCATAG 327 0.4067 MGIRLLPEMVHYAKQILRLRCHHSKHNFSGQSSNIFYVPKGHFAVYVGDEDEYKKRFVVPVSYLKQPLFQDLLSRAEEEFGFDYPMDNLVFPCAIDDFVNLTSRLNGS* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00460 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 30 105 IPR003676 GO:0009733
Rops3g00460 108 Pfam Auxin responsive protein 31 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00460 Rops-Chr3 5727302 5727628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00460 38 98 Calmodulin-binding Proteins AT5G20810 52.459 4.69e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00460 K14488 - cam:101505472 139.428