Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00459 ATGGGTATTCGTCTGCCGTTTATGGTTCATCATGCAAAACAGATATTCAAGTCAACGTCACAGCATCTCCAAAATGGAAAAGAGTCCAATGTTCCAAAGGGTCATATAGCAGTCTATGTTGGAGAGTTGCAAAAGAAGAGGTTTGTGGTTCCAATATCATACCTGAACCATCCTTCGTTTCTTGACTTGCTGAACCGAGCCGAAGAAGAGTTTGGCTTCAATCATCCCATGGGTGGTCTCACAATTCCTTGCAAAGAAGATGCCTTCATCAATCTTACCTCTCAACTGCGTGCCTTGTGA 300 0.4333 MGIRLPFMVHHAKQIFKSTSQHLQNGKESNVPKGHIAVYVGELQKKRFVVPISYLNHPSFLDLLNRAEEEFGFNHPMGGLTIPCKEDAFINLTSQLRAL* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00459 99 Pfam Auxin responsive protein 12 94 IPR003676 GO:0009733
Rops3g00459 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00459 Rops-Chr3 5717173 5717648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00459 30 89 Calmodulin-binding Proteins AT5G20810 55.000 6.09e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00459 K14488 - gmx:100803474 163.696