Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00452 ATGGAGGATGGTGAGCTTGATTTCTCGCACCAGGAAGTGTTTTCGAGTCCGAACATGGGTGAAATCCCTAGCAGTGGTTCAATGGACAGTTTCTTCGATGAACTCTTGAAGGATTCGCATGCTTGTACTCACACACACACGTGCAACCCTCCTGGTCCTGATTTTTCACATACACACACGTGTTATCATGTTCATACCAAAATTGTGCCATCTCCTGCTGAGGACCAGGTTGGTACCGATGATACTGCTGAGTCTGCTGAGAAGAAGTCGAATAAGAGGCCGCTTGGGAATAAAGAAGCAGTTCGCAAGTATCGTGAGAAGAAGAAAGCACGGGCAGCGTCCCTTGAGGATGAGGTTGTGAAATTGAGAGCTTTGAATCATCATTTGATGAAGAAGTTGCAGGGGCAGGCTGCTTTGGAGGCTGAAATTGCAAGGCTTAAGTGTTTACTGGTTGATATCAGGGGAAGGATTGAAGGAGAAATCGGATCTTTTCCGTATCAGAAATCACCTAATGCAAACCCCCCAATGACAAATATGCCTGGTTCGTATGTGATTAACCCTTGCAACGTGCAGTGTGATGATAGGGTTTATTGCCTTCATCCAGGAGCTGATGGAAAGATTACAGAAGGTGCGTCACTAAATGGGGAAGGATTTGGTGGTTGTGAATTTGAGAATCTGCAGTGTCTGGCTGGCCAGAATTTGGGGCTCAAGGATCTTCAACCTCGTGGAGTTGCACAAACAGTGTCTAATGTCAATTCTTCTGCTTCAAATAAAAGAAAAGGGGGATCTCGTGCAGCAACAGCTGGTTGA 810 0.4593 MEDGELDFSHQEVFSSPNMGEIPSSGSMDSFFDELLKDSHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPSPAEDQVGTDDTAESAEKKSNKRPLGNKEAVRKYREKKKARAASLEDEVVKLRALNHHLMKKLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKSPNANPPMTNMPGSYVINPCNVQCDDRVYCLHPGADGKITEGASLNGEGFGGCEFENLQCLAGQNLGLKDLQPRGVAQTVSNVNSSASNKRKGGSRAATAG* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00452 269 MobiDBLite consensus disorder prediction 81 102 - -
Rops3g00452 269 Coils Coil 98 132 - -
Rops3g00452 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Rops3g00452 269 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Rops3g00452 269 MobiDBLite consensus disorder prediction 248 269 - -
Rops3g00452 269 MobiDBLite consensus disorder prediction 1 22 - -
Rops3g00452 269 Pfam Basic region leucine zipper 87 142 IPR004827 GO:0003700|GO:0006355
Rops3g00452 269 CDD bZIP 92 144 - -
Rops3g00452 269 Gene3D - 78 153 - -
Rops3g00452 269 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Rops3g00452 269 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 165 IPR031106 GO:0003700|GO:0006351
Rops3g00452 269 MobiDBLite consensus disorder prediction 72 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00452 Rops-Chr3 5608871 5611466 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00452 1 268 bZIP Transcription Factor Family AT4G35040 63.704 1.83e-117 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops3g00452 bZIP_2 6.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00452 K25785 - gmx:780549 438.728