Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00435 ATGGGCATCTCTGACACCTCCATTTCCGCGGCGAGCAAATGGCTGGGTTTTGTCACCGCCGTTTGGATTCAATCTATCTCCGGCAACAACTACACATTCTCCAACTACTCCCACGCTCTCAAATCTCTTATGCACCTTACCCAAGTGGAACTCAATAACCTCTCCGTCGCTAAAGATATTGGCAAGGCCTTTGGTCTTCTCGCCGGTTTAGCTTCCGACCGGTTCCCCACGTGGGCCATTCTCCTCATTGGTTCCCTCGAAGGTGTCGTAGGTTATGGTGTTCAGTGGCTGGTCGTTGGTCAAATGATTAAGCCACTTCCCTATTGGCTCATGTGTGTGTTTCTATGTATGGGTGGAAATAGCACAACGTGGATGAACACTGCCGTTTTGGTAACTTGCATACGTAACTTTCGGAGAAACCGAGGACCTGTTTCTGGGATTCTCAAAGGTTTTGTCGGGTTGAGCACTGCTATATTTACCAACCTTTGTTCTGCTCTCTTCGCTGATGACCCTGCGTTTTTTCTTCTAATGCTCGCTGTTATTCCCTTCGTCGTTTGCCTCACCGGTGTGTTTTTCCTCCGGGAGGTTCCTCCGGCTAAGGCTTCCTCTTCCGCTGAAGATTCAGAAGAGGCGAAGTACTTCGGTGTCTTTAGCGCTGTAGCGGTCGTTGTCGCTGTTTATCTCTTGGCTTATGGTTTTGTGCCAAACCCCAGCACTGTCGTTTCGAGCGTGTTCGTTGCCGTTTTGCTTGTTTTGTTGGTCTCGCCGTTGGGGATCCCGGTTCACTCTTACTTGAGGGGATGGAAATTGGACCGGGTCGAATCGGGTGCTGATATTGAGGGTCCGCGGGTCAATGAACCGTTGCTTCAAAGCCGTGACAAGGAAAACGAAACGGTGGCTCAGGTGGCGGCGGAGGAGGAGGTGGCGGTGGTAGTGAAGGTGCGACCGGCGGTGGGAGAGGAGCACACGATATCGGAGGCGCTGTGCAGTGTGGATTTTTGGATCTTGTTCGTGTCGTTTTTGTGTGGGGTTGGAACGGGTTTGGCTGTTATGAACAATATGGGTCAGATCGGGTTGGCCCTCGGGTACCCGGATGTGTCACTCTTTGTTTCCTTAACAAGCATTTGGGGCTTTTTTGGACGAATCGTATCGGGTTCGGTTTCGGAGCTTTTCATCAAGAAAGCTGCAACACCAAGACCTCTTTGGAATGCAGCATCTCAGATTCTGATGGCTGTTGGTTACATACTCCTAGCCATGGCTATGCCTGGTTCACTTTACATTGGCTCTATTATAGTTGGCATATGTTATGGAGTGAGGCTTGCAGTTACAGTCCCAACAGCCTCTGAGTTATTTGGACTCAAATATTATGGTCTCATCTACAATATTCTCATCCTCAACCTTCCCCTAGGCTCTTTCCTCTTTTCTGGGTTGCTTGCTGGCATACTGTATGATATGGAAGCAACTGCAACAGAGGGAGGAGGCAACACCTGTGTTGGAGGTCATTGTTACAGGCTAGTCTTTATAATCATGGCTGGAGCATGTGTTGTTGGGTTCTTCTTAGATGTTCTATTGTCAATCAGAACCAAGAATGTCTACAACCAGATTTCCATTAGCAAGAAATCCAAGAAATCCTCAGGGACATCAAGTAGCTAA 1653 0.4888 MGISDTSISAASKWLGFVTAVWIQSISGNNYTFSNYSHALKSLMHLTQVELNNLSVAKDIGKAFGLLAGLASDRFPTWAILLIGSLEGVVGYGVQWLVVGQMIKPLPYWLMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGFVGLSTAIFTNLCSALFADDPAFFLLMLAVIPFVVCLTGVFFLREVPPAKASSSAEDSEEAKYFGVFSAVAVVVAVYLLAYGFVPNPSTVVSSVFVAVLLVLLVSPLGIPVHSYLRGWKLDRVESGADIEGPRVNEPLLQSRDKENETVAQVAAEEEVAVVVKVRPAVGEEHTISEALCSVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYPDVSLFVSLTSIWGFFGRIVSGSVSELFIKKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGSIIVGICYGVRLAVTVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATATEGGGNTCVGGHCYRLVFIIMAGACVVGFFLDVLLSIRTKNVYNQISISKKSKKSSGTSSS* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00435 550 Gene3D MFS general substrate transporter like domains 327 531 IPR036259 -
Rops3g00435 550 Gene3D MFS general substrate transporter like domains 12 208 IPR036259 -
Rops3g00435 550 SUPERFAMILY MFS general substrate transporter 28 530 IPR036259 -
Rops3g00435 550 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 533 - -
Rops3g00435 550 Pfam Nodulin-like 13 261 IPR010658 -
Rops3g00435 550 CDD MFS_Mch1p_like 12 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00435 Rops-Chr3 5375110 5378514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00435 11 547 Nodulin-like Gene Family AT4G34950 68.694 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00435 - - gmx:100800237 793.882