Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00429 ATGTGTCGTGGTTGGTTTTTGGCCTTCGGATATCTATTGTTCACAGTTTTTGTTTTGGTTATTCCTTTATTTGTGAGGAGATATGAGTCTCCAGAAGTTATTGTTTACATGGGTTTCATGTTTGCGTTGATCATATGGTTTTCTACAAAGATGTTTGCATCATCATCAACATTAACAACAAATCATGAGAATAACATCTCACACGGGAACGAGAGGAGACAATCTCGACTTGCTGGGGCTGCAACTGTATGGGCTGAGAGGGAACAATACAGACAAAGTTCACGAATGCTGGCTTTGGGACGAAGAGCAGAGGCTGCTAGGTGGGTTATGAGAGCCTTGCCTCCTGTTAGAAGCTTCAATGCAGAAGAAACTAATGAATCCCAGAATGAGTGTTCTATTTGCATGGAAGAATTCAAGAAGGGGGAGTTGATTCAACCTTTTGGAGTTTGTGTTCATCAATTCCATGCCTCCTGTGTCAACTCTTGGTTGCTTGGTGGAAAGACTACTTGTCCTGTTTGTCGTAAGGATTTGGCTACTACTTTGCCACTAGAGGCTCATTGA 561 0.4225 MCRGWFLAFGYLLFTVFVLVIPLFVRRYESPEVIVYMGFMFALIIWFSTKMFASSSTLTTNHENNISHGNERRQSRLAGAATVWAEREQYRQSSRMLALGRRAEAARWVMRALPPVRSFNAEETNESQNECSICMEEFKKGELIQPFGVCVHQFHASCVNSWLLGGKTTCPVCRKDLATTLPLEAH* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00429 186 Pfam Ring finger domain 129 174 IPR001841 -
Rops3g00429 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 180 IPR013083 -
Rops3g00429 186 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 33 176 IPR044675 -
Rops3g00429 186 SMART ring_2 131 173 IPR001841 -
Rops3g00429 186 SUPERFAMILY RING/U-box 116 180 - -
Rops3g00429 186 ProSiteProfiles Zinc finger RING-type profile. 131 174 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00429 107 180 C3H Transcription Factor Family AT1G22670 37.838 1.30e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00429 - - aprc:113865236 147.517