Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00375 ATGTCGCGTCAATCGACGTCGTCTGCCTTCACCAAATCGAAGACCCTCGACAACAAATATATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCAATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGCAAGAGATTGATTTGTTAAAGAATTTGAACCACAAAAACATTGTAAAGTATCTTGGATCTTTAAAGACAAAGAGCCACCTGCACATAATTCTTGAGTATGTGGAGAATGGCTCACTTGCAAATATTATCAAGCCAAATAAATTTGGACCATTTCCAGAATCATTGGTTGCGGTTTATATTGCCCAGGTGTTGGAAGGCTTGGTTTATCTACATGAGCAAGGTGTTATCCATCGGGATATTAAGGGTGCAAACATATTGACAACTAAAGAGGGTCTTGTCAAACTTGCTGATTTTGGTGTTGCAACAAAGTTAACAGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACACCATACTGGATGGCCCCAGAGGTTATAGAAATGTCTGGGGTCTGTGCAGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGTGTACCTCCTTATTACGATTTGCAGCCTATGCCAGCTCTTTTCCGTATTGTCCAGGATGAGCATCCTCCGATTCCTGATAGCCTTTCACCTGACATTACTGATTTTCTGCATCAATGCTTTAAGAAGGATGCTAGACAAAGGCCTGATGCTAAAACACTGCTGTCTCACCCCTGGATTCAAAACTGTAGACGTGCCCTGCAGTCTTCTCTTCGTCATAGTGGAACATTAAGAAATATAGAGGAAGGTGATTCTGCAGATACAGAAGGTGATCATAAGAGCGCTGGTGAAAGCTCTTCTGTGGAGAAAGAGGACCCTGCAAAAGAGTTTTCAACTGTGGCTGCTAATAGCAGCAAATCTCGTGAAGACAATACTTCTAATCTTCCCAATGAAAGAACAGAGAAGGCAGATGATATACCATCCGATCAGGTTCTTACCTTAGCCATTCATGAGAAGTCACTTCTACAAACTGGGTCTAGCCAACTCTCTTCTAATAGAGAAGTGATTTCTGAGCCAACTGGCAATCATGAAATTTCAAATGCTAATGAAGTCACGATGAATGGAGAAGTTGGATCTCTACAATCAAGAGGAATGGCTAATAAGGTTGGAGGAAAAGACAGTTCTATCAATAATGGCAATAAATCATTCGCTTTTGGACCAAGAGGTCAAGATAATGGTTCCCTAAAGGCAATGAAGATACCATCCCTGGTGGAAGGAAATGAGCTGAGTAAATTTAGTGACCCTCCAGGAGATGCCTACTTCTATGATTTATTTAATCAATTAGATAAACAACCTGGGGAGGTGGTAGCTGAGGCATCCCCATTTGCATCCACCTCACAAATGGCTACAGGTAATGCATCTATGAATGACGGTGGGAAAAATGACCTAGCCAAAGAGTTGAGGGCTAAAATGGCTCGAAAGCAATGGGAGAAGGAGAGTGAAATTGGACAGGCAAACAATGGTGGGAACCTTCTACACCGAGTAATGATAGGTGTTCTAAAAGATGATGTAATTGATATAGATGGTTTGGTCTTTGATGAGAAACTTCCTGGAGAAAACCTTTTTCCTCTGCAGGCAGCTGAGTTCAGCAAATTAGTTGGTTCATTAAAACCAGAGGAATCAGAAGACGTGATTGTCTCTGCATGTCAGAAACTTATTGGTATATTTAACCAACGCCCAGAGCAGAAGGTTGTTTTTGTTACTCAGCATGGTTTACTTCCTTTGACTGACTTGCTAGAAGTTCCTAAAACACGTGTCATATGTTTTGTGCTTCAGCTTATAAATCAAATAATCAAAGACAACACTGATTTTCAAGAAAATGCATGTCTTGTTGGATTGATTCCTGCAGTCATGAGCTTTGCAGTACCTGATCGTCCCCGAGAGATTCGTATGGAAGCAGCTTATTTTTTACAGCAGCTTTGTCAGTCAAGTTCTTTGACATTACAAATGTTCATAGCTTGCCGAGGAATACCTGTTTTGGTAGGATTTCTTGAGGCTGATTATGCCAAGTACAGGGAGATGGTTCATCTGGCTATTGATGGGATGTGGCAGGTATTTAAGCTCCAGCAGTCAACGCCTAGAAATGATTTTTGTCGGATAGCTGCAAAAAATGGAATACTCCTTAGGCTTATAAATACTCTTTATAGCTTAAATGAGTCAACTCGATTAGCTTCTATGTCTGCTGGTGGTGGATTTATGGTTGATGGTTCAGCTCAACGGCCACGTTCTGGTATCTTGGACCCTACACATCCTTTTATGAACCAGAATGAGGCACCACTCTCTTCAGTAGACCAGCAAGATCTCCCTAAAGTGAGGCGTGGAGTACATGATCATCACTTAGAACCTTCACATGCCTCATCTTCCAATCCTCGAAGATCAGATGCCAACTACCCCATGGACGTTGATAGACCTCAATCAAGCAATGCAGCAGCTGAAGGTGTGTCGCTAGAGAAGAGTTCTCATCTAGCATCCAGGGAATCTTCAGCTGGAGCATTGAAAGAGCGAGAGAATGTGGATCGTTGGAAAACTGATCCTTCTCGATCTGATGTTGAACCCAGACAGCAGCGTATCAGTATTTCTGCTAACAGGACATCAACAGATAGGCCTCCAAAATTGACAGAACCTTCATCTAATGGGTTGTCAGTGACAGGAGCTTTACAGCAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTGGAGAAAGAGCCCCCATCAGGACGTTTTTCTGGACAGCTTGATTATGTACGTCAGTTTTCGGGATTAGAAAGACATGAAAGTGGACTCCCTTTGTTACATGCCTCTGAAAAGAAAACAAATGGTGAGCTGGACTTTTTGATGGCAGAATTTGCAGATGTTTCTCAACGTGGAAGGGAAAATGGAAATCTTGATTCCAGTGCTAGAGTGTCTCACAAAGTCACTCCCAAGAAATTAGGAACTTTTGGTTCTAGTGAAGGAGCTGCTTCCACATCTGGGATTGTATCTCAGACAGCATCAGGTGTACTGTCTGGTTCAGGTGTTCTAAATGCTAGGCCAGGCAGTGCAACATCATCTGGGCTACTTTCCCACATGGTTTCATCATTAAATGCAGAAGTTGCAAGAGAGTACCTTGAAAAAGTGGCAGATCTTCTGCTTGAGTTTGCACAAGCTGACACAACAGTGAAGTCTTACATGTGTAGCCAAAGCTTGCTCAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCCTATTTTGTTAAAGATACTGAAGTGTATTAATCATCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAAGCAATAAAATACTTGATACCTAATCTTGAACTCAAAGAAGGGTATCTTGTATCAGAGATACATCATGAGGTCTTGAACACACTGTTCAATTTATGCAAGATAAATAAGAGGAGACAAGAACAAGCAGCTGAAAATGGAATCATTCCCCATTTGATGCAATTCATCACATCAAATTCCCCCCTGAAACAATACGCATTGCCTCTGCTATGTGACATGGCCCATGCATCTCGCAACTCAAGGGAGCAGTTAAGGGCTCATGGTGGTTTGGATGTCTATTTGAACCTACTTGAGGATGAGCTCTGGTCTGTGACAGCACTGGATTCAATTGCTGTTTGCTTAGCCCATGACAATGACAATAGGAAAGTTGAACAAGCATTGCTGAAAAAAGATGCAGTTCAGAAGCTTGTGAAGTTCTTCCAGTGCTGTCCAGAGCAGCATTTTGTACACATATTGGAGCCATTCTTGAAAATCATCACAAAATCTGCCCGGATCAATACCACATTGGCTGTTAATGGATTAACACCATTGCTCATTGCAAGGCTTGATCATCAGGATGCTATTGCTCGTCTTAATTTACTCAGGCTAATAAAGGCTGTTTATGAACATCACCCTCAGCCGAAGAAGCTGATCGTAGAGAATGATTTACCTGAGAAACTTCAAAACTTAATAGGGGAACGGAGAGATGGACAAGTGTTGGTCAAACAGATGGCCACTTCATTACTTAAAGCTCTACACATAAACACTGTTTTGTAA 4197 0.4182 MSRQSTSSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLHQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTLRNIEEGDSADTEGDHKSAGESSSVEKEDPAKEFSTVAANSSKSREDNTSNLPNERTEKADDIPSDQVLTLAIHEKSLLQTGSSQLSSNREVISEPTGNHEISNANEVTMNGEVGSLQSRGMANKVGGKDSSINNGNKSFAFGPRGQDNGSLKAMKIPSLVEGNELSKFSDPPGDAYFYDLFNQLDKQPGEVVAEASPFASTSQMATGNASMNDGGKNDLAKELRAKMARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAAEFSKLVGSLKPEESEDVIVSACQKLIGIFNQRPEQKVVFVTQHGLLPLTDLLEVPKTRVICFVLQLINQIIKDNTDFQENACLVGLIPAVMSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASMSAGGGFMVDGSAQRPRSGILDPTHPFMNQNEAPLSSVDQQDLPKVRRGVHDHHLEPSHASSSNPRRSDANYPMDVDRPQSSNAAAEGVSLEKSSHLASRESSAGALKERENVDRWKTDPSRSDVEPRQQRISISANRTSTDRPPKLTEPSSNGLSVTGALQQEQVRPLLSLLEKEPPSGRFSGQLDYVRQFSGLERHESGLPLLHASEKKTNGELDFLMAEFADVSQRGRENGNLDSSARVSHKVTPKKLGTFGSSEGAASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNAEVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGYLVSEIHHEVLNTLFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL* 1399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00375 1398 MobiDBLite consensus disorder prediction 833 873 - -
Rops3g00375 1398 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g00375 1398 MobiDBLite consensus disorder prediction 288 353 - -
Rops3g00375 1398 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Rops3g00375 1398 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Rops3g00375 1398 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Rops3g00375 1398 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Rops3g00375 1398 FunFam MAP3K epsilon protein kinase 1 570 784 - -
Rops3g00375 1398 FunFam MAP3K epsilon protein kinase 1 17 306 - -
Rops3g00375 1398 MobiDBLite consensus disorder prediction 418 434 - -
Rops3g00375 1398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Rops3g00375 1398 Gene3D Transferase(Phosphotransferase) domain 1 17 313 - -
Rops3g00375 1398 MobiDBLite consensus disorder prediction 414 439 - -
Rops3g00375 1398 CDD STKc_Cdc7_like 19 274 - -
Rops3g00375 1398 SUPERFAMILY ARM repeat 576 773 IPR016024 -
Rops3g00375 1398 MobiDBLite consensus disorder prediction 825 931 - -
Rops3g00375 1398 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 16 720 - -
Rops3g00375 1398 MobiDBLite consensus disorder prediction 339 353 - -
Rops3g00375 1398 FunFam MAP3K epsilon protein kinase 1-like 1052 1393 - -
Rops3g00375 1398 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Rops3g00375 1398 MobiDBLite consensus disorder prediction 899 931 - -
Rops3g00375 1398 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g00375 1398 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g00375 1398 MobiDBLite consensus disorder prediction 786 813 - -
Rops3g00375 1398 MobiDBLite consensus disorder prediction 291 323 - -
Rops3g00375 1398 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Rops3g00375 1398 Gene3D - 1053 1395 IPR011989 -
Rops3g00375 1398 SUPERFAMILY ARM repeat 1065 1391 IPR016024 -
Rops3g00375 1398 MobiDBLite consensus disorder prediction 875 898 - -
Rops3g00375 1398 Gene3D - 567 786 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00375 Rops-Chr3 4661002 4694964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00375 1 1398 MAP Kinase Kinase Kinase AT3G13530 72.906 0.0 2008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Rops3g00375 Pkinase 7.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00375 - - gmx:100813256 2463.34