Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00365 ATGCATGTAGGTGCCCACACGATTGGACAAGCGCAATGCTTCACATTTCGTGAGAGGATATACAACAATGGCAGTGACATAGATGCTGGATTTGGTAGCACTCGCCGACGTGGTTGTCCATCCTCACGTAGCACTGAGAACGATGGGAAGTTGGCAGCACTAGACTTGGTCACACCCAATTCTTTTGACAACAACTACTTCAAGAATTTAATTCAGAAGAAGGGTCTTCTTCACTCCGATCAAGTTCTTTTCAGTGGAGGATCTACAGACTCTATCGTTTCTGAATATAGCAAAAATCCTACCATATTTAAGTCTGACTTTACGGCTTCTATGATCAAGATAGGCGACATCGAACCGTTGACCGATTCAGCTGGGATCATAAGAAGGATCTGCAGTGCTGTCAACTAA 408 0.4412 MHVGAHTIGQAQCFTFRERIYNNGSDIDAGFGSTRRRGCPSSRSTENDGKLAALDLVTPNSFDNNYFKNLIQKKGLLHSDQVLFSGGSTDSIVSEYSKNPTIFKSDFTASMIKIGDIEPLTDSAGIIRRICSAVN* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00365 135 Gene3D Peroxidase, domain 2 3 114 - -
Rops3g00365 135 PANTHER PEROXIDASE 72-RELATED 4 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g00365 135 SUPERFAMILY Heme-dependent peroxidases 3 135 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops3g00365 135 Gene3D - 115 135 - -
Rops3g00365 135 ProSiteProfiles Plant heme peroxidase family profile. 1 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g00365 135 PRINTS Plant peroxidase signature 69 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g00365 135 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g00365 135 PRINTS Plant peroxidase signature 53 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g00365 135 FunFam Peroxidase 2 114 - -
Rops3g00365 135 Pfam Peroxidase 3 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00365 Rops-Chr3 4581596 4582003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00365 4 135 Peroxidase AT1G14550 70.677 1.60e-61 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00365 K00430 - gmx:100786161 231.106