Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00355 ATGACCAACACCACCACCAATATTATTAGTATTACACTTACCCCCTTCAAACTGACCAAGCTCATGCATTTCCACATTCCCTTTCATTCCAACACCATGACCAAACCAAGCTATCTCAATCTCACCCTTAGTCTCTCCATCCTGCAAGATATCCAAATTTTGGAGATTCTCATTGCAGTTTTTGTCTTCATAGTGATCCATTCTCTAAGGCAAAAGAAGCATCATGGCCTACCCATTTGGCCTGTCCTTGGGATGCTTCCTTCTTTGGTCACTGGACTAAGAACCAACATGTATGAATGGATCTCTGATGTGCTTGTCAGACAAAATGGGACCTTTAGATTCAAAGGGGCTTGGTTTAGCAGCCTCAACAGCATTGTCACCTCTGATCCTCGCAACCTCGAGCATCTTCTTAAAACCAAGTTCCCTAACTTCCCTAAAGGAAGTTACTTCAGGAACACAGTTAGAGACCTACTTGGAGATGGTATATTCAATGCAGATGATGAGACATGGCAAAAGCAAAGGAAGACAGCAAGCATTGAGTTTCATTCTACCAAGTTCAGGCAACTAACAACTGAGTCCTTATTTGAGCTTGTCCACTCACGGCTCTTACCTGTCTTAGAGGCATCAGTTAAGAAATGTGTTGCCATAGATCTCCAAGACATCCTTTTAAGGCTAACTTTCGATAACGTGTGCATGATAGCCTTTGGTGTTGATCCTGGTTGTTTGAGCCCGGGATTGCCTGAGATACCATTTGCAAGAGCCTTTGAGGATGCAACTGAAGCCACAATGCTTCGTTTTGTTACCCCAACATGCATATGGAAGGCCATGAGGTTTCTCAACTTGGGGGTGGAAAGAATGCTAAAGGAATCAATAAAAGGAGTTGATGAATTTGCTGAGAATGTTATCCAGATCAGAAAGGAGGAGCTAGCTTTGCATTGTGAGGGTAAGAAGCAAAGGTCAGACTTATTAACTGTGTTTATGAAGATGAAGGATGAGAATGGACAATCATATTCAGATAAGTTCTTGAGGGATATATGTGTGAACTTCATATTAGCAGGGAGGGACACTTCTTCAGTTGCTTTGAGCTGGTTTTTTTGGTTGCTTGATCAGAATCCTGAGGTGGAGGAGAAGATACTAGCAGAGATATGCAGAGTAGTGAGTCAGAGGGAAGACATAAAAAAGGAAGAAAGTGAAATTTCTTTGACATTTAGGCCGGAGGAGATAAAAAATATGGATTATCTGCATGCTGCTTTATCAGAAGCTCTGAGATTATATCCTTCTGTGCCTGTGGATCACAAGGAGGTAGTTGAAGATGACACTTTCCCAGATGGGACAGTGCTAAAGAAAGGTACTAAAGTGATCTATGCAATATATGCAATGGGAAGAATGGAAGCCATATGGGGCAAGGATTGCAAGGAGTTCAAGCCAGAAAGATGGTTAAGAGATGGCCGTTTTATGAGTGAGTCTGCATACAAATTCACTGCCTTCAATGGTGGACCTCGCCTTTGCTTAGGCAAAGATTTTGCATACTACCAGATGAAATATGCTGCTGCCAGCATCATATACCGCTACCATGTGAAGGTGGTAGAGAATCACCCTGTGATACCAAAGGTTGCATTAACTATGTACATGAAGCATGGGATGAAGGTTAACCTCTACAGGAGGGATGCTACAGAAATTCAAAAATACTGGGAAGATTGTTTGAAATGA 1710 0.4211 MTNTTTNIISITLTPFKLTKLMHFHIPFHSNTMTKPSYLNLTLSLSILQDIQILEILIAVFVFIVIHSLRQKKHHGLPIWPVLGMLPSLVTGLRTNMYEWISDVLVRQNGTFRFKGAWFSSLNSIVTSDPRNLEHLLKTKFPNFPKGSYFRNTVRDLLGDGIFNADDETWQKQRKTASIEFHSTKFRQLTTESLFELVHSRLLPVLEASVKKCVAIDLQDILLRLTFDNVCMIAFGVDPGCLSPGLPEIPFARAFEDATEATMLRFVTPTCIWKAMRFLNLGVERMLKESIKGVDEFAENVIQIRKEELALHCEGKKQRSDLLTVFMKMKDENGQSYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPEVEEKILAEICRVVSQREDIKKEESEISLTFRPEEIKNMDYLHAALSEALRLYPSVPVDHKEVVEDDTFPDGTVLKKGTKVIYAIYAMGRMEAIWGKDCKEFKPERWLRDGRFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYHVKVVENHPVIPKVALTMYMKHGMKVNLYRRDATEIQKYWEDCLK* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00355 569 PRINTS E-class P450 group I signature 503 526 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00355 569 PRINTS E-class P450 group I signature 493 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00355 569 PRINTS E-class P450 group I signature 415 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00355 569 PRINTS E-class P450 group I signature 341 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00355 569 PRINTS E-class P450 group I signature 361 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00355 569 CDD CYP86A 112 548 - -
Rops3g00355 569 FunFam Cytochrome P450 68 558 - -
Rops3g00355 569 Pfam Cytochrome P450 78 538 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00355 569 SUPERFAMILY Cytochrome P450 70 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00355 569 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 496 505 IPR017972 GO:0005506|GO:0016705
Rops3g00355 569 PRINTS P450 superfamily signature 503 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00355 569 PRINTS P450 superfamily signature 494 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00355 569 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00355 569 PRINTS P450 superfamily signature 352 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00355 569 PANTHER CYTOCHROME P450 65 550 - -
Rops3g00355 569 Gene3D Cytochrome P450 71 566 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00355 Rops-Chr3 4437727 4440461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00355 45 564 Cytochrome P450 AT5G23190 75.432 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00355 K15402 - gmx:100809503 975.696